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Series GSE49298 Query DataSets for GSE49298
Status Public on Sep 27, 2013
Title Identification of microRNAs differentially expressed in prostatic secretions of patients with prostate cancer
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary In this study, we aimed to identify a miRNA expression signature that could be used to distinguish PCa from BPH. We have shown for the first time in the literature the presence of miRNAs in the PSS. We suggest PSS as a powerful non-invasive source for evaluation of prognosis in PCa, since prostate massages can be easily applied during routine examination. Our results showed that certain differentially expressed miRNAs in PSS could be used as diagnostics markers.
 
Overall design Prostate secretion samples (PSS) from 23 PCa and 25 benign prostate hyperplasia (BPH) patients were obtained from Urology Department of Bagcilar Educational and Research Hospital (Istanbul). MicroRNA (miRNA) profiling of eight PSS (four from BPH, four from PCa patients) were performed using microarray. Four of significantly deregulated miRNAs were further confirmed using quantitative reverse-transcription PCR (qRT-PCR). Statistical analysis was performed using Student’s t-test. ROC curves were plotted with SPSS-15.0.
 
Contributor(s) Guzel E, Karatas OF, Semercioz A, Ekici S, Aykan S, Yentur S, Creighton CJ, Mittmann M, Ozen M
Citation(s) 24976077
Submission date Jul 29, 2013
Last update date Oct 29, 2018
Contact name Mustafa Ozen
E-mail(s) mozen@bcm.edu
Organization name Istanbul University
Department Medical Genetics
Street address Fatih
City Istanbul
ZIP/Postal code 34300
Country Turkey
 
Platforms (1)
GPL15018 Agilent-031181 Unrestricted_Human_miRNA_V16.0_Microarray 030840 (Feature Number version)
Samples (8)
GSM1197016 Prostate Secretion Fluid_BPH1
GSM1197017 Prostate Secretion Fluid_BPH2
GSM1197018 Prostate Secretion Fluid_BPH3
Relations
BioProject PRJNA213574

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE49298_RAW.tar 24.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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