|
| Status |
Public on Dec 01, 2013 |
| Title |
Affymetrix SNP 6.0 data for analysis of esophageal adenocarcinoma samples |
| Organism |
Homo sapiens |
| Experiment type |
Genome variation profiling by SNP array
SNP genotyping by SNP array
|
| Summary |
Esophageal adenocarcinoma is characterized by complex chromosomal alterations. Tumors were evaluated to identify regions of recurrent copy gains and losses and to determine the prognositic significance of the degree of segmental aneuploidy as measured by SNP array.
|
| |
|
| Overall design |
41 superficial esophageal adenocarcinomas were analyzed for copy number abnormalities. Matched normal lymph node tissue was used as a copy number reference.
|
| |
|
| Contributor(s) |
Davison J, LaFramboise W |
| Citation(s) |
24454681 |
| Submission date |
Jul 31, 2013 |
| Last update date |
Nov 27, 2018 |
| Contact name |
William Armand LaFramboise |
| E-mail(s) |
laframboisewa@upmc.edu
|
| Phone |
412-623-6160
|
| Organization name |
University of Pittsburgh
|
| Department |
Pathology
|
| Street address |
5230 Centre Avenue
|
| City |
Pittsburgh |
| State/province |
PA |
| ZIP/Postal code |
15232 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL6801 |
[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array |
|
| Samples (82)
|
|
| Relations |
| BioProject |
PRJNA213873 |
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