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Series GSE51287 Query DataSets for GSE51287
Status Public on Sep 11, 2014
Title Methylation profiles of esophageal squamous cell carcinoma patients and cancer-free individual in Taiwan.
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiling of tumor and normal samples with esophageal squamous cell carcinoma patients. The Illumina GolodenGate methylation cancer panel I was used to obtain DNA methylation profiles across approximately 1,505 CpGs in esophageal squemous cell carcinoma samples. Samples included normal, tumors and plasma samples with esophageal squamous cell carcinoma, also inculding the plasma samples with cancer-free individual.
 
Overall design Bisulfite converted DNA from the 288 samples were hybridised to the Illumina GolodenGate methylation cancer panel I
 
Contributor(s) Kuo I, Wang Y
Citation(s) 25015989
Submission date Sep 30, 2013
Last update date Sep 11, 2014
Contact name Yi-Ching Wang
E-mail(s) ycw5798@mail.ncku.edu.tw
Phone +886-6-2353535
Organization name National Cheng Kung University
Department Department of Pharmacology, College of Medicine
Street address No.1, University Road, Tainan 70101, Taiwan, R. O. C.
City Tainan
ZIP/Postal code 70101
Country Taiwan
 
Platforms (1)
GPL9183 Illumina GoldenGate Methylation Cancer Panel I
Samples (288)
GSM1241914 genomic DNA from esophageal squamous cell carcinoma Sample 1-1
GSM1241915 genomic DNA from esophageal squamous cell carcinoma Sample 1-2
GSM1241916 genomic DNA from esophageal squamous cell carcinoma Sample 1-3
Relations
BioProject PRJNA222310

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51287_signal_intensities.txt.gz 4.7 Mb (ftp)(http) TXT
Processed data included within Sample table
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