|
| Status |
Public on Nov 01, 2013 |
| Title |
Transcriptome sequencing of porcine hypothalamic samples |
| Organism |
Sus scrofa |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Purpose: Identification of genes regulating growth and fatness traits in pig.
Methods: Hypothalamic transcriptome analysis through RNA-seq and differential expression analysis of divergent pigs for growth and fatness traits.
Results: Characterization of the transcripts expressed in the porcine hypothalamus and identification of differentially expressed genes, some of them located within previously described QTL regions.
Conclusions: Characterization of porcine hypothalamic transcriptome and identification of relevant genes and transcription factors related to the traits of interest.
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| |
|
| Overall design |
Transcriptome sequencing of 10 hypothamic samples of two groups of divergent pigs for growth and fatness (five per group).
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| |
|
| Contributor(s) |
Pérez-Montarelo D, Fernández Ávila AI |
| Citation(s) |
24280257 |
| |
| Submission date |
Oct 31, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Dafne Pérez Montarelo |
| Organization name |
INIA
|
| Department |
Animals Genetics
|
| Street address |
Crta. de la Coruña Km 7.5
|
| City |
Madrid |
| State/province |
Madrid |
| ZIP/Postal code |
28040 |
| Country |
Spain |
| |
|
| Platforms (1) |
| GPL11429 |
Illumina HiSeq 2000 (Sus scrofa) |
|
| Samples (10)
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|
| Relations |
| BioProject |
PRJNA225941 |
| SRA |
SRP032451 |
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