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Series GSE52242 Query DataSets for GSE52242
Status Public on Dec 23, 2013
Title Deletion of conserved protein phosphatases reverses defects associated with mitochondrial DNA damage in Saccharomyces cerevisiae
Organism Saccharomyces cerevisiae
Experiment type Expression profiling by high throughput sequencing
Summary Mitochondrial biogenesis is regulated by signaling pathways sensitive to extracellular conditions and to the internal environment of the cell. We found that deletion of protein phosphatase 2A (PP2A) or of protein phosphatase 6 (PP6) diminishes the nuclear transcriptional response associated with mtDNA damage.
 
Overall design Six samples were analyzed to determine message RNA levels.
 
Contributor(s) Garipler G, Mutlu N, Lack NA, Dunn CD
Citation(s) 24474773
Submission date Nov 08, 2013
Last update date May 15, 2019
Contact name Cory David Dunn
E-mail(s) cdunn@ku.edu.tr
Organization name KoƧ University
Department Molecular Biology and Genetics
Street address Rumelifeneri Yolu
City Sariyer
State/province Istanbul
ZIP/Postal code 34450
Country Turkey
 
Platforms (1)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (6)
GSM1261711 CDD410
GSM1261712 CDD415
GSM1261713 CDD450
Relations
BioProject PRJNA227236
SRA SRP032818

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE52242_Transcript_Diff_Exp.txt.gz 3.6 Mb (ftp)(http) TXT
GSE52242_Transcript_FPKM.txt.gz 563.2 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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