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Series GSE53577 Query DataSets for GSE53577
Status Public on Dec 23, 2013
Title Affymetrix SNP array data for Pit Bull Terrier
Organism Canis lupus familiaris
Experiment type SNP genotyping by SNP array
Summary The data were used to define the homozygous regions in OCD-risk breeds, together with published Gentrain dataset.
 
Overall design Affymetrix SNP arrays were performed according to the manufacturer's directions.
Homozygosity analysis was performed.
 
Contributor(s) Noh HJ, Tang R, Karlsson EK, Lindblad-Toh K
Citation(s) 24995881
Submission date Dec 22, 2013
Last update date May 20, 2015
Contact name Hyun Ji Noh
E-mail(s) noh@broadinstitute.org
Organization name Broad Institute
Department Genome Sequencing and Analysis
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02141
Country USA
 
Platforms (1)
GPL18091 [DogSty06m520431P] Affymetrix version 2 canine SNP array
Samples (20)
GSM1296338 PitBullTerrier-BI_27380
GSM1296339 PitBullTerrier-BI_27381
GSM1296340 PitBullTerrier-BI_27382
Relations
BioProject PRJNA232430

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53577_RAW.tar 349.3 Mb (http)(custom) TAR (of CEL, CHP, TXT)
Processed data provided as supplementary file

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