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| Status |
Public on Jan 06, 2015 |
| Title |
Field of Cancerization in Peripheral Airway Epithelium: Gene Expresssion |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
Field of cancerization in the airway epithelium has been increasing examined to understand early pathogenesis of non-small cell lung cancer.
This study uses microarray high-throughput technologies to characterize the molecular aberrations in the terminal airway and bronchoalveolar cells in the context of field cancerization in high-risk smokers and lung cancer patients.
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| Overall design |
We collected peripheral airway brushings from the contral-lateral lung of the tumor from cancer patients (n=17) and smoker controls (n=13); Total RNA were obtained from the peripheral airway epithelium.
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| Contributor(s) |
Tsay JJ, Rom WN |
| Citation(s) |
25705890 |
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| Submission date |
Jan 29, 2014 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Jun-Chieh James Tsay |
| E-mail(s) |
tsayj01@nyumc.org
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| Organization name |
NYU Langone Medical Center
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| Department |
Medicine
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| Street address |
562 First Ave. NBV 7N27
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| City |
new york |
| State/province |
NY |
| ZIP/Postal code |
10016 |
| Country |
USA |
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| Platforms (1) |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
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| Samples (30)
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| GSM1316828 |
peripheral airway epithelial cells, smoker 1, rep1 |
| GSM1316829 |
peripheral airway epithelial cells, cancer 11, rep1 |
| GSM1316830 |
peripheral airway epithelial cells, cancer 12, rep1 |
| GSM1316831 |
peripheral airway epithelial cells, cancer 13, rep1 |
| GSM1316832 |
peripheral airway epithelial cells, cancer 14, rep1 |
| GSM1316833 |
peripheral airway epithelial cells, cancer 15, rep1 |
| GSM1316834 |
peripheral airway epithelial cells, cancer 17, rep1 |
| GSM1316835 |
peripheral airway epithelial cells, cancer 18, rep1 |
| GSM1316836 |
peripheral airway epithelial cells, cancer 19, rep1 |
| GSM1316837 |
peripheral airway epithelial cells, smoker 2, rep1 |
| GSM1316838 |
peripheral airway epithelial cells, cancer 21, rep1 |
| GSM1316839 |
peripheral airway epithelial cells, cancer 22, rep1 |
| GSM1316840 |
peripheral airway epithelial cells, cancer 23, rep1 |
| GSM1316841 |
peripheral airway epithelial cells, cancer 24, rep1 |
| GSM1316842 |
peripheral airway epithelial cells, cancer 25, rep1 |
| GSM1316843 |
peripheral airway epithelial cells, smoker 27, rep1 |
| GSM1316844 |
peripheral airway epithelial cells, smoker 28, rep1 |
| GSM1316845 |
peripheral airway epithelial cells, smoker 29, rep1 |
| GSM1316846 |
peripheral airway epithelial cells, smoker 3, rep1 |
| GSM1316847 |
peripheral airway epithelial cells, smoker 30, rep1 |
| GSM1316848 |
peripheral airway epithelial cells, cancer 31, rep1 |
| GSM1316849 |
peripheral airway epithelial cells, cancer 32, rep1 |
| GSM1316850 |
peripheral airway epithelial cells, cancer 33, rep1 |
| GSM1316851 |
peripheral airway epithelial cells, cancer 34, rep1 |
| GSM1316852 |
peripheral airway epithelial cells, smoker 35, rep1 |
| GSM1316853 |
peripheral airway epithelial cells, smoker 36, rep1 |
| GSM1316854 |
peripheral airway epithelial cells, smoker 5, rep1 |
| GSM1316855 |
peripheral airway epithelial cells, smoker 6, rep1 |
| GSM1316856 |
peripheral airway epithelial cells, smoker 7, rep1 |
| GSM1316857 |
peripheral airway epithelial cells, smoker 8, rep1 |
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| This SubSeries is part of SuperSeries: |
| GSE54543 |
Field of Cancerization in Peripheral Airway Epithelium |
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| Relations |
| BioProject |
PRJNA236646 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE54495_RAW.tar |
117.1 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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