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| Status |
Public on May 21, 2014 |
| Title |
Global expression profiles of the wild-type and overexpression of OsNMD3ΔNLS transgenic plants |
| Organism |
Oryza sativa |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Plants have mechanisms that coordinate protein synthesis and gene transcription, although they operate at different cellular sites. The altered translational efficiency may have a feedback effect on gene expression. To determine the global changes in ribosome biogenesis, we used an Illumina RNA sequencing approach to investigate the global expression profiles of the wild-type,OsNMD3ΔNLSL1,and OsNMD3ΔNLSL2 plants.These expression profiles suggested that overexpression of OsNMD3ΔNLS affected ribosome biogenesis and certain basic pathways, leading to pleotropic abnormalities in plant growth.
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| Overall design |
The mRNA profiles of the 2nd internodes of development-matched wild-type and overexpression of OsNMD3ΔNLS transgenic plants.
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| Contributor(s) |
Shi Y, Zhang B, Zhou Y |
| Citation(s) |
24723395 |
| |
| Submission date |
Feb 20, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Baocai Zhang |
| E-mail(s) |
bczhang@genetics.ac.cn
|
| Phone |
86-10-64807628
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| Organization name |
Institute of Genetics and Developmental Biology, CAS
|
| Department |
Center for Genome Biology
|
| Street address |
Beichen west road
|
| City |
Beijing |
| State/province |
Beijng |
| ZIP/Postal code |
100101 |
| Country |
China |
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| Platforms (1) |
| GPL13160 |
Illumina HiSeq 2000 (Oryza sativa) |
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| Samples (3) |
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| Relations |
| BioProject |
PRJNA238962 |
| SRA |
SRP038713 |
