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Series GSE57548 Query DataSets for GSE57548
Status Public on Oct 31, 2014
Title SNP6 profiling of metaplastic breast carcinoma
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Summary SNP6 profiling of metaplastic breast carcinoma
 
Overall design Metaplastic breast carcinoma (MBC) is a rare and aggressive histologic type of breast cancer, preferentially displaying a triple-negative phenotype (i.e. lacking estrogen receptor, progesterone receptor and HER2 expression). We sought to define the transcriptomic heterogeneity of MBCs on the basis of current gene expression microarray-based classifiers and to determine whether MBCs display gene copy number profiles consistent with those of BRCA1-associated breast cancers.
 
Contributor(s) Weigelt B, Ng C, Vincent-Salomon A, Reis-Filho JS
Citation(s) 25412848
Submission date May 12, 2014
Last update date Nov 27, 2018
Contact name Charlotte K Y Ng
Organization name University Hospital Basel
Department Pathology
Street address Schönbeinstrasse 40
City Basel
ZIP/Postal code 4003
Country Switzerland
 
Platforms (1)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (26)
GSM1384582 Metaplastic Carcinoma META30
GSM1384583 Metaplastic Carcinoma META31
GSM1384584 Metaplastic Carcinoma META32
This SubSeries is part of SuperSeries:
GSE57549 Metaplastic breast carcinomas display genomic and transcriptomic heterogeneity
Relations
BioProject PRJNA246689

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE57548_RAW.tar 765.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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