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Series GSE57971 Query DataSets for GSE57971
Status Public on May 28, 2014
Title MeDIP for ten early passage melanoma cell cultures
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Malignant melanoma is the most fatal skin cancer with a high degree of genetic and epigenetic aberrations. To investigate the role of DNA methylation on melanoma heterogeneity, we performed methylated DNA immunoprecipitation (MeDIP) microarray analysis of 10 primary melanoma cell cultures.
 
Overall design methylated DNA immunoprecipitation (MeDIP) microarray analysis of 10 primary melanoma cell cultures
 
Contributor(s) Cheng PF
Citation(s) 25885555
Submission date May 27, 2014
Last update date Apr 14, 2016
Contact name Phil Fang Cheng
E-mail(s) phil.cheng@hug.ch
Organization name Hopitaux universitaires de Geneve
Department Oncology
Street address Rue Gabrielle-Perret-Gentil 4
City Geneva
ZIP/Postal code 1205
Country Switzerland
 
Platforms (2)
GPL15160 NimbleGen Human DNA Methylation 3x720K CpG Island Plus RefSeq Promoter Arrays (090618_HG18_CpG_Refseq_Prom_MeDIP)
GPL17148 NimbleGen Human DNA Methylation 3x720K CpG Island Plus RefSeq Promoter Array [100718_HG18_CpG_Refseq_Prom_MeDIP]
Samples (10)
GSM1398935 M000921
GSM1398936 M980513
GSM1398937 M080423
Relations
BioProject PRJNA248623

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE57971_RAW.tar 450.2 Mb (http)(custom) TAR (of PAIR, TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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