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| Status |
Public on Jun 12, 2014 |
| Title |
Genome-wide microarray analysis of Atlantic cod (Gadus morhua) oocyte and embryo |
| Organism |
Gadus morhua |
| Experiment type |
Expression profiling by array
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| Summary |
Microarray analyses were performed to assess temporal profiles of maternal and zygotic transcripts and their developmental roles. Results revealed the presence of multiple transcripts involved in patterning and development of tissues and organs long before activation of the zygotic genome. The switch from maternal to zygotic developmental programs is associated with large-scale modification of chromosomes.
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| Overall design |
Analyses included unfertilized and newly fertilized oocytes, mid blastulas and embryos at different stages of segmentation. Pooled organs of adult cod were used as common reference.
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| Contributor(s) |
Aleksei K, Adrijana S |
| Citation(s) |
25023375 |
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| Submission date |
Jun 11, 2014 |
| Last update date |
Aug 04, 2014 |
| Contact name |
Aleksei Krasnov |
| E-mail(s) |
aleksei.krasnov@nofima.no
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| Phone |
+47 97602165
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| Organization name |
Nofima AS
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| Department |
Fish Health
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| Street address |
Osloveien 1
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| City |
Aas |
| ZIP/Postal code |
1430 |
| Country |
Norway |
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| Platforms (1) |
| GPL18779 |
Agilent_033054 Genome-wide Atlantic cod microarray, second version_ACIQ1 |
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| Samples (13)
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| GSM1409795 |
Oocytes 2 hours post fertilization, sample 1 |
| GSM1409796 |
Oocytes 2 hours post fertilization, sample 2 |
| GSM1409797 |
Oocytes 2 hours post fertilization, sample 3 |
| GSM1409798 |
Mid blastula, sample 1 |
| GSM1409799 |
Mid blastula, sample 2 |
| GSM1409800 |
Mid blastula, sample 3 |
| GSM1409801 |
12 somites, sample 1 |
| GSM1409802 |
12 somites, sample 2 |
| GSM1409803 |
52 somites, sample 1 |
| GSM1409804 |
52 somites, sample 2 |
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| Relations |
| BioProject |
PRJNA252437 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE58392_RAW.tar |
41.9 Mb |
(http)(custom) |
TAR (of GPR) |
| Processed data included within Sample table |
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