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Status |
Public on Jul 23, 2014 |
Title |
Transcriptome maps of mRNP biogenesis factors define pre-mRNA recognition |
Organism |
Saccharomyces cerevisiae |
Experiment type |
Other
|
Summary |
Biogenesis of eukaryotic messenger ribonucleoprotein complexes (mRNPs) involves the synthesis, splicing, and 3’-processing of pre-mRNA, and the assembly of mature mRNPs for nuclear export. We mapped 23 mRNP biogenesis factors onto the newly synthesized yeast transcriptome, providing ~10^5-10^6 high-confidence RNA interaction sites per factor.
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Overall design |
PAR-CLIP data of 23 mRNP biogenesis factors in Saccharomyces cerevisiae
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Contributor(s) |
Bäjen C, Torkler P |
Citation(s) |
25192364 |
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Submission date |
Jul 22, 2014 |
Last update date |
May 15, 2019 |
Contact name |
Carlo Bäjen |
E-mail(s) |
carlo.baejen@mpibpc.mpg.de
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Organization name |
Max Planck Institute for Biophysical Chemistry
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Department |
Molecular Biology
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Lab |
Prof. Patrick Cramer
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Street address |
Am Fassberg 11
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City |
Göttingen |
ZIP/Postal code |
37077 |
Country |
Germany |
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Platforms (2) |
GPL13272 |
Illumina Genome Analyzer IIx (Saccharomyces cerevisiae) |
GPL18085 |
Illumina HiSeq 1500 (Saccharomyces cerevisiae) |
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Samples (23)
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Relations |
BioProject |
PRJNA255917 |
SRA |
SRP044716 |