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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Mar 11, 2011 |
| Title |
Illumina Genome Analyzer IIx (Saccharomyces cerevisiae) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Saccharomyces cerevisiae |
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| Submission date |
Mar 11, 2011 |
| Last update date |
Sep 07, 2011 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (302)
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GSM718984, GSM718985, GSM718986, GSM718987, GSM721161, GSM721162
GSM721163, GSM721164, GSM721165, GSM721166, GSM721167, GSM721168, GSM721169, GSM721170, GSM721171, GSM721172, GSM721173, GSM721174, GSM721175, GSM721176, GSM721183, GSM721184, GSM721185, GSM721186, GSM721187, GSM721188, GSM721189, GSM721190, GSM721191, GSM724099, GSM724100, GSM724101, GSM724102, GSM724103, GSM724104, GSM724105, GSM724106, GSM724107, GSM724108, GSM724109, GSM724110, GSM724111, GSM724112, GSM724113, GSM724114, GSM724115, GSM724116, GSM724117, GSM724118, GSM761667, GSM761668, GSM789268, GSM789269, GSM791763, GSM791764, GSM791765, GSM791766, GSM791767, GSM791768, GSM828671, GSM828672, GSM828673, GSM828674, GSM840084, GSM840085, GSM849109, GSM849110, GSM849111, GSM849112, GSM941005, GSM941006, GSM941007, GSM941008, GSM941009, GSM941010, GSM941011, GSM941012, GSM941013, GSM941014, GSM941015, GSM941016, GSM941017, GSM941018, GSM951292, GSM951293, GSM951296, GSM951297, GSM951300, GSM951301, GSM956926, GSM956927, GSM956928, GSM956929, GSM984236, GSM984237, GSM984238, GSM984239, GSM984240, GSM984241, GSM984242, GSM984244, GSM984245, GSM984246, GSM984247, GSM984248, GSM984249, GSM984250, GSM984251, GSM1018217, GSM1018218, GSM1018219, GSM1018220, GSM1018221, GSM1018222, GSM1018223, GSM1018224, GSM1018225, GSM1018226, GSM1018227, GSM1018228, GSM1018229, GSM1018230, GSM1018231, GSM1019778, GSM1019779, GSM1019780, GSM1019781, GSM1019782, GSM1019783, GSM1094447, GSM1094449, GSM1103176, GSM1103177, GSM1103178, GSM1103179, GSM1103180, GSM1103181, GSM1103182, GSM1103183, GSM1103184, GSM1103185, GSM1103186, GSM1103187, GSM1103188, GSM1103189, GSM1103190, GSM1103191, GSM1103192, GSM1103193, GSM1103194, GSM1103195, GSM1103196, GSM1103197, GSM1103198, GSM1103199, GSM1137715, GSM1137718, GSM1137720, GSM1137722, GSM1137725, GSM1139042, GSM1139043, GSM1139044, GSM1139045, GSM1144378, GSM1144379, GSM1247439, GSM1247440, GSM1247441, GSM1247442, GSM1247443, GSM1247444, GSM1247445, GSM1247446, GSM1247447, GSM1247448, GSM1247449, GSM1247450, GSM1308201, GSM1308203, GSM1308205, GSM1308207, GSM1314109, GSM1314110, GSM1314111, GSM1314112, GSM1372722, GSM1372723, GSM1372724, GSM1372725, GSM1372728, GSM1372729, GSM1372730, GSM1372731, GSM1372732, GSM1372733, GSM1372734, GSM1372735, GSM1372736, GSM1442538, GSM1442540, GSM1442541, GSM1442542, GSM1442543, GSM1442545, GSM1442546, GSM1442548, GSM1442550, GSM1442551, GSM1442552, GSM1442553, GSM1442554, GSM1442556, GSM1442557, GSM1442558, GSM1442559, GSM1466924, GSM1466925, GSM1466926, GSM1466927, GSM1467865, GSM1467866, GSM1547550, GSM1564170, GSM1564171, GSM1564172, GSM1564173, GSM1600614, GSM1600615, GSM1635425, GSM1635426, GSM1635427, GSM1635428, GSM1701906, GSM1701907, GSM1701908, GSM1701909, GSM1706746, GSM1706747, GSM1706748, GSM1706749, GSM1706750, GSM1706751, GSM1706752, GSM1706753, GSM1706754, GSM1706755, GSM1706756, GSM1706757, GSM1706758, GSM1706759, GSM1706760, GSM1706761, GSM1706762, GSM1905026, GSM1905027, GSM1905028, GSM1905029, GSM1905030, GSM1905031, GSM1905032, GSM1905033, GSM1905034, GSM1905035, GSM1905036, GSM1905037, GSM1905038, GSM1905039, GSM1905040, GSM1905041, GSM1905042, GSM1905043, GSM1905044, GSM1905045, GSM1905046, GSM1905047, GSM1905048, GSM1905049, GSM1905050, GSM1905051, GSM1905052, GSM1905053, GSM1905054, GSM1905055, GSM1905056, GSM1905057, GSM1905058, GSM1905059, GSM1905060, GSM1905061, GSM1905062, GSM1905063, GSM1905064, GSM1971591, GSM2088327, GSM2326081, GSM2326083, GSM2472800, GSM2472801, GSM3122087, GSM3122088, GSM3122089
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| Series (50)
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| GSE29018 |
Pronounced and Extensive Microtubule Defects in a Saccharomyces cerevisiae DIS3 Mutant |
| GSE29122 |
Sch9 regulates ribosome biogenesis via Stb3, Dot6 and Tod6 and the histone deacetylase complex RPD3L (mRNA-Seq data) |
| GSE29124 |
Sch9 regulates ribosome biogenesis via Stb3, Dot6 and Tod6 and the histone deacetylase complex RPD3L (ChIP-Seq data) |
| GSE29125 |
Sch9 regulates ribosome biogenesis via Stb3, Dot6 and Tod6 and the histone deacetylase complex RPD3L |
| GSE29291 |
Effects of Histone H3 depletion on nucleosome occupancy and positioning through the S. cerevisiae genome [single-end MNase-seq] |
| GSE29292 |
Effects of Histone H3 depletion on nucleosome occupancy and positioning through the S. cerevisiae genome [Paired-end Mnase-seq] |
| GSE29293 |
Effects of Histone H3 depletion on nucleosome occupancy and positioning through the S. cerevisiae genome [RNA_seq] |
| GSE29294 |
Effects of Histone H3 depletion on nucleosome occupancy and positioning through the S. cerevisiae genome |
| GSE30703 |
Budding yeast mRNA poly(A) site mapping |
| GSE30706 |
Budding yeast mRNA export and processing factors |
| GSE31764 |
Transcriptome-Wide Binding Sites for Components of the Saccharomyces cerevisiae Non-poly(A) termination Pathway: Nrd1, Nab3 and Sen1 |
| GSE31820 |
Targets of Ty3 transposition in Saccharomyces cerevisiae |
| GSE33497 |
The effects on transcriptome from absence of Spt4/Supt4h by RNA-seq |
| GSE33986 |
Retrotransposon Ty1 integration targets specifically positioned asymmetric nucleosomal DNA segments in tRNA hotspots |
| GSE34438 |
Ribosome profiling of wild-type and loc1- cells in S. cerevisiae |
| GSE34534 |
Genome-wide analyses of Loc1, Puf6, and Khd1 |
| GSE38382 |
RNA polymerase II collision interrupts convergent transcription (ChIP-seq) |
| GSE38383 |
RNA polymerase II collision interrupts convergent transcription (RNA-seq) |
| GSE38384 |
RNA polymerase II collision interrupts convergent transcription |
| GSE38875 |
Expression evolution in gene groups: Inferring non-neutral regulatory change in pathways from transcriptional profiling data |
| GSE39147 |
Genome-wide Ifh1p occupancy at the OX growth phase and RC quiescent phase of the yeast metabolic cycle |
| GSE40046 |
Transcriptome-wide Analysis of Exosome Targets in the Budding Yeast Saccharomyces cerevisiae |
| GSE41494 |
Hog1 bypasses stress-mediated down-regulation of transcription by PolII redistribution and chromatin remodeling |
| GSE41590 |
Genome-wide translational changes induced by the prion [PSI+] |
| GSE44959 |
CLIP-seq of S. cerevisiae Drn1-TAP and Dbr1-TAP |
| GSE45366 |
Loss of a Conserved tRNA Anticodon Modification Perturbs Cellular Signaling |
| GSE46742 |
A transcriptome-wide atlas of RNP compositions reveals diverse classes of mRNAs and lncRNAs |
| GSE46838 |
Inheritance of gene expression level and selective constraints on trans- and cis-regulatory changes in yeast |
| GSE47073 |
PING 2.0: An R/Bioconductor package for nucleosome positioning using next-generation sequencing data |
| GSE51532 |
Protein Kinase A Regulates Gene-Specific Translational Adaptation in Differentiating Yeast |
| GSE54105 |
H2A.Z marks antisense promoters and has positive effects on antisense transcript levels in budding yeast |
| GSE54377 |
Different nucleosomal landscapes at early and late replicating origins in Saccharomyces cerevisiae |
| GSE56992 |
The Scc2NIPBL/Scc4MAU2 complex acts in sister chromatid cohesion and transcriptional regulation by maintaining nucleosome-free regions [Mnase-seq] |
| GSE56993 |
The Scc2NIPBL/Scc4MAU2 complex acts in sister chromatid cohesion and transcriptional regulation by maintaining nucleosome-free regions [ChIP-seq] |
| GSE56994 |
The Scc2NIPBL/Scc4MAU2 complex acts in sister chromatid cohesion and transcriptional regulation by maintaining nucleosome-free regions. |
| GSE59676 |
Transcriptome maps of mRNP biogenesis factors define pre-mRNA recognition |
| GSE60181 |
Threonine-4 of the budding yeast RNAP II CTD couples transcription with Htz1-mediated chromatin remodeling |
| GSE60221 |
The Nuclear Exosome is Active and Important during Budding Yeast Meiosis |
| GSE64090 |
Mapping of dsRNA in yeast using reconstituted RNAi pathway |
| GSE65592 |
RSC and ISW1 Chromatin Remodelers Display Functional and Chromatin-based Promoter Antagonism [ChIP-seq] |
| GSE65594 |
The Chromatin Remodelers RSC and ISW1 Display Functional and Chromatin-based Promoter Antagonism |
| GSE66979 |
Comparative genomics reveals Chd1 as a determinant of nucleosome spacing in vivo |
| GSE69384 |
Nonsense-Mediated Decay restricts lncRNAs levels in yeast unless blocked by double-stranded RNA structure |
| GSE69682 |
Transcriptome Engineering Promotes a Fermentative Transcriptional State |
| GSE73890 |
The conformation of yeast chromosome III is mating type-dependent and controlled by the recombination enhancer |
| GSE75991 |
The PIN domain endonuclease Utp24 cleaves pre-ribosomal RNA at two coupled sites in yeast and humans |
| GSE79222 |
Genome-wide analysis of RNA polymerase II termination at protein-coding genes |
| GSE87238 |
In vivo RNA binding sites of the yeast ribosome biogenesis factor Utp23 |
| GSE94313 |
Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome dynamics |
| GSE113869 |
Rpd3L Contributes to the DNA Damage Sensitivity of Saccharomyces cerevisiae Checkpoint Mutants |
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| Supplementary data files not provided |
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