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| Status |
Public on Jan 27, 2016 |
| Title |
ChIP-Seq of H3K4 methylation in neurons isolated from E16.5 mouse embryonic cortices from WT and SMCX KO mice |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We conducted ChIP-Seq of H3K4 methylation in neurons isolated from E16.5 mouse embryonic cortices from WT and SMCX KO mice and harvested after 10 days in vitro culture.
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| Overall design |
We sequenced H3K4me1, H3K4me3 ChIP and Input samples from mouse embryonic cortical neurons cultured in vitro for 10 days. Experiments were performed in biological and technical duplicates.
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| |
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| Contributor(s) |
Iwase S, Brookes E, Agarwal S, Badeaux AI, Vallianatos CN, Shi Y |
| Citation(s) |
26804915 |
| |
| Submission date |
Sep 02, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Saurabh Agarwal |
| E-mail(s) |
saurabha@umich.edu
|
| Phone |
7346478811
|
| Organization name |
University of Michigan
|
| Department |
Human Genetics
|
| Lab |
Shigeki Iwase
|
| Street address |
1241 E. Catherine St. 5815 Medical Science II
|
| City |
Ann Arbor |
| State/province |
Michigan |
| ZIP/Postal code |
48109 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (12)
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| This SubSeries is part of SuperSeries: |
| GSE61036 |
Aggression, cognitive and neurodevelopmental abnormalities associated with disruption of the intellectual disability and histone demethylase gene Kdm5c |
|
| Relations |
| BioProject |
PRJNA260122 |
| SRA |
SRP046259 |
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