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Series GSE61036 Query DataSets for GSE61036
Status Public on Jan 27, 2016
Title Aggression, cognitive and neurodevelopmental abnormalities associated with disruption of the intellectual disability and histone demethylase gene Kdm5c
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 26804915
Submission date Sep 03, 2014
Last update date May 15, 2019
Contact name Saurabh Agarwal
E-mail(s) saurabha@umich.edu
Phone 7346478811
Organization name University of Michigan
Department Human Genetics
Lab Shigeki Iwase
Street address 1241 E. Catherine St. 5815 Medical Science II
City Ann Arbor
State/province Michigan
ZIP/Postal code 48109
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (38)
GSM1495623 CHIPSEQ_mCN_WT_H3K4me1_rep1
GSM1495624 CHIPSEQ_mCN_SMCX_KO_H3K4me1_rep1
GSM1495625 CHIPSEQ_mCN_WT_H3K4me3_rep1
This SuperSeries is composed of the following SubSeries:
GSE61023 ChIP-Seq of H3K4 methylation in neurons isolated from E16.5 mouse embryonic cortices from WT and SMCX KO mice
GSE61024 RNA-Seq in neurons from E16.5 mouse embryonic cortices from WT and SMCX KO mice
GSE74630 RNA-Seq of Pre-frontal cortex (PFC) and Amygdala from 3-6 month old adult mice
Relations
BioProject PRJNA260123

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61036_RAW.tar 4.7 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
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