NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE65598 Query DataSets for GSE65598
Status Public on Mar 31, 2017
Title Diurnal variation for rice leaves in Toyama field in 2012
Organism Oryza sativa
Experiment type Expression profiling by array
Summary We have previously demonstrated statistical modeling of gene expression under various environmental factors using field transcriptome data obtained from samples grown in a paddy field at Tsukuba, Japan.
In this series of experiments, we would like to improve the models for practical use. In order to do that, we have done field transcriptome assay in seven paddy fields at different sites in Japan (or, Sappro, Furukawa, Toyama, Tsukuba, Takatsuki, Furukawa, and Fukuoka). This data is from one of the places, Toyama.
 
Overall design Time-course transcriptional profiling of rice leaf in Toyama field in 2012. This experiment was performed to analyze the dynamics of field transcriptome data.
24h time series with 2h interval were sampled for 2 developmental stage with no replicate.
 
Contributor(s) Izawa T
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Feb 04, 2015
Last update date Apr 01, 2017
Contact name Takeshi Izawa
Organization name National Institute of Agrobiological Sciences
Street address 2-1-2 Kannondai
City Tsukuba
State/province Ibaraki
ZIP/Postal code 305-8602
Country Japan
 
Platforms (1)
GPL19684 Agilent-046633 Oryza sativa 180K array os_180k_130118 (Feature Number version)
Samples (51)
GSM1600656 July_10_2012_at_12:00_in_Toyama_DPS_76
GSM1600657 July_10_2012_at_12:00_in_Toyama_DPS_53
GSM1600658 July_10_2012_at_14:00_in_Toyama_DPS_76
Relations
BioProject PRJNA274468

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE65598_RAW.tar 47.8 Mb (http)(custom) TAR (of TXT)
GSE65598_S254663310003_A4.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65598_S254663310005_A2.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65598_S254663310005_A4.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65598_S254663310013_A2.txt.gz 41.8 Mb (ftp)(http) TXT
GSE65598_S254663310013_A4.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65598_S254663310016_A2.txt.gz 41.7 Mb (ftp)(http) TXT
GSE65598_S254663310016_A4.txt.gz 41.7 Mb (ftp)(http) TXT
GSE65598_S254663310017_A2.txt.gz 41.7 Mb (ftp)(http) TXT
GSE65598_S254663310017_A4.txt.gz 41.7 Mb (ftp)(http) TXT
GSE65598_S254663310019_A2.txt.gz 41.8 Mb (ftp)(http) TXT
GSE65598_S254663310019_A4.txt.gz 41.7 Mb (ftp)(http) TXT
GSE65598_S254663310022_A2.txt.gz 41.8 Mb (ftp)(http) TXT
GSE65598_S254663310022_A4.txt.gz 41.8 Mb (ftp)(http) TXT
GSE65598_S254663310023_A2.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65598_S254663310023_A4.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65598_S254663310025_A2.txt.gz 41.7 Mb (ftp)(http) TXT
GSE65598_S254663310025_A4.txt.gz 41.7 Mb (ftp)(http) TXT
GSE65598_S254663310033_A2.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65598_S254663310033_A4.txt.gz 41.8 Mb (ftp)(http) TXT
GSE65598_S254663310035_A2.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65598_S254663310035_A4.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65598_S254663310036_A4.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65598_S254663310040_A2.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65598_S254663310040_A4.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65598_S254663310042_A2.txt.gz 41.7 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap