NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE65606 Query DataSets for GSE65606
Status Public on Mar 31, 2017
Title Two time-points for fertilized rice leaves in Tsukuba field in 2013
Organism Oryza sativa
Experiment type Expression profiling by array
Summary We have previously demonstrated statistical modeling of gene expression under various environmental factors using field transcriptome data obtained from samples grown in a paddy field at Tsukuba, Japan. In this seires of experiments, we would like to improve the models for practical use. In order to do that, we have done field transcriptome assay in seven paddy fields at different sites in Japan (or, Sappro, Furukawa, Toyama, Tsukuba, Takatsuki, Furukawa, and Fukuoka). This data is from one of the places, Tsukuba.
Time-course transcriptional profiling of rice leaf of fertilization in Tsukuba field in 2013. This experiment was performed to analyze the dynamics of field transcriptome data.
 
Overall design The submitted samples were field transcirptome data in a paddy field at Tsukuba in Japan. Leaf samples were harvested in a 6 hr(or 8hr)-interval for 13 times. This set corresponds to three-day time-seires data. Transplanting dates varied as reported in each sample record. The fertilizated rice leaves were collected at 10:40 and 16:40 with no replicate.
Fertilizated rice leaves were collected at 10:40 and 16:40 with no replicate.
 
Contributor(s) Izawa T
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Feb 04, 2015
Last update date Apr 01, 2017
Contact name Takeshi Izawa
Organization name National Institute of Agrobiological Sciences
Street address 2-1-2 Kannondai
City Tsukuba
State/province Ibaraki
ZIP/Postal code 305-8602
Country Japan
 
Platforms (1)
GPL19684 Agilent-046633 Oryza sativa 180K array os_180k_130118 (Feature Number version)
Samples (96)
GSM1601084 Jun_5_2013_at_10:50_in_Tsukuba_DPS_8
GSM1601085 Jun_5_2013_at_10:50_in_Tsukuba_DPS_8_Fer1
GSM1601086 Jun_5_2013_at_10:50_in_Tsukuba_DPS_8_Fer2
Relations
BioProject PRJNA274482

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE65606_RAW.tar 6.3 Mb (http)(custom) TAR
GSE65606_S254663310067_A1.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65606_S254663310067_A2.txt.gz 42.3 Mb (ftp)(http) TXT
GSE65606_S254663310067_A3.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65606_S254663310067_A4.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65606_S254663310076_A1.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310076_A2.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310076_A3.txt.gz 41.8 Mb (ftp)(http) TXT
GSE65606_S254663310076_A4.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310077_A1.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310077_A2.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310077_A3.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310077_A4.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65606_S254663310078_A1.txt.gz 42.2 Mb (ftp)(http) TXT
GSE65606_S254663310078_A2.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310078_A3.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310078_A4.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310079_A1.txt.gz 42.4 Mb (ftp)(http) TXT
GSE65606_S254663310079_A2.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65606_S254663310079_A3.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65606_S254663310079_A4.txt.gz 42.5 Mb (ftp)(http) TXT
GSE65606_S254663310080_A1.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310080_A2.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310080_A3.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310080_A4.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65606_S254663310108_A1.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310108_A2.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310108_A3.txt.gz 42.2 Mb (ftp)(http) TXT
GSE65606_S254663310108_A4.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310112_A1.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310112_A2.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310112_A3.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310112_A4.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310113_A1.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310113_A2.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310113_A3.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310113_A4.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310116_A1.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310116_A2.txt.gz 42.3 Mb (ftp)(http) TXT
GSE65606_S254663310116_A3.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310116_A4.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310118_A1.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310118_A2.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310118_A3.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310118_A4.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310125_A1.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65606_S254663310125_A2.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310125_A3.txt.gz 41.9 Mb (ftp)(http) TXT
GSE65606_S254663310125_A4.txt.gz 41.9 Mb (ftp)(http) TXT
Processed data included within Sample table
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap