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| Status |
Public on Mar 01, 2020 |
| Title |
Molecular characterization of ovarian serous cystadenomas and fibromas [Copy number] |
| Organism |
Homo sapiens |
| Experiment type |
Genome variation profiling by SNP array
SNP genotyping by SNP array
|
| Summary |
This study aimed to characterize the molecular changes in benign serous ovarian tumors (cystadenomas and cystadenofibromas) in comparison to pure fibromas.
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| |
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| Overall design |
8 pure fibromas, 19 benign serous tumors and 3 normal ovaries. Integration of genomic copy number analysis (Affymetrix SNP6.0 arrays and Affymetrix OncoScan), exome sequencing (NimbleGen Roche v1 and 2) and expression analysis (Affymetrix Gene 1.0 ST).
SNP6 dataset: Normalized data and raw data are provided.
OncoScan dataset: Normalized data is provided. Raw data is retained by Affymetrix.
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| |
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| Contributor(s) |
Campbell IG, Hunter SM, Gorringe KL |
| Citation(s) |
32698852 |
| Submission date |
Mar 23, 2015 |
| Last update date |
Aug 10, 2020 |
| Contact name |
Kylie L Gorringe |
| E-mail(s) |
kylie.gorringe@petermac.org
|
| Organization name |
Peter MacCallum Cancer Centre
|
| Department |
Research Division
|
| Lab |
Cancer Genetics Laboratory
|
| Street address |
St Andrew's Pl
|
| City |
East Melbourne |
| State/province |
Victoria |
| ZIP/Postal code |
3002 |
| Country |
Australia |
| |
|
| Platforms (2) |
| GPL6801 |
[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array |
| GPL13270 |
Affymetrix OncoScan™ FFPE Express |
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| Samples (42)
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| This SubSeries is part of SuperSeries: |
| GSE67224 |
Molecular characterization of ovarian serous cystadenomas and fibromas |
|
| Relations |
| BioProject |
PRJNA279277 |
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