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Series GSE69426 Query DataSets for GSE69426
Status Public on Dec 01, 2015
Title High-resolution mapping of H4K16 and H3K23 acetylation reveals conserved and unique distribution patterns and functions in Arabidopsis and rice
Organisms Arabidopsis thaliana; Oryza sativa
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We generated genome-wide high-resolution maps of H4K16ac and H3K23ac in Arabidopsis thaliana and Oryza sativa.
 
Overall design For wild-type Arabidopsis and rice plants, ChIP-seq was performed with H4K16ac and H3K23ac antibodies.
 
Contributor(s) Zhong X, Lu L
Citation(s) 26646900
Submission date Jun 01, 2015
Last update date May 15, 2019
Contact name Xuehua Zhong
Organization name Wisconsin Institute for Discovery
Department Epigenetics
Street address 330 N. Orchard St.
City Madison
State/province WI
ZIP/Postal code 53705
Country USA
 
Platforms (2)
GPL13160 Illumina HiSeq 2000 (Oryza sativa)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (5)
GSM1701016 Col-H3
GSM1701017 Col-H3K23ac
GSM1701018 Col-H4K16ac
Relations
BioProject PRJNA285469
SRA SRP058921

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE69426_RAW.tar 549.1 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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