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| Status |
Public on Mar 10, 2016 |
| Title |
Comparison of transcriptomes in class-B GATA mutants with cytokinin treatments |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
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| Summary |
We have used Agilent whole genome arrays (v4) to compare the gene expression changes between 14 days-old Arabidopsis seedlings with or without cytokinin treatments in wild type as well as the following mutant genotypes: gnc gnl (AT5G56860, AT4G26150), gata16 gata17 gata17l (AT5G49300, AT3G16870, AT4G16141), gnc gnl gata16 gata17 gata17l (AT5G56860, AT4G26150, AT5G49300, AT3G16870, AT4G16141)
Three independent biological samples were prepared for each genotype. Experiment was performed in two rounds: Col-0_1, gnc gnl, quintuple and Col-0_2, triple.
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| Overall design |
Three replicate measurements of three biological samples were prepared for each genotype.
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| Contributor(s) |
Schwechheimer C, Ranftl Q, Behringer C |
| Citation(s) |
26829982, 29453227 |
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| Submission date |
Aug 07, 2015 |
| Last update date |
May 22, 2019 |
| Contact name |
Quirin Ludwig Ranftl |
| E-mail(s) |
quirin.ranftl@wzw.tum.de
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| Organization name |
TU München
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| Department |
Wissenschaftszentrum Weihenstephan
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| Lab |
Plant Systems Biology
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| Street address |
Emil-Ramann-Straße 4
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| City |
Freising |
| ZIP/Postal code |
85354 |
| Country |
Germany |
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| Platforms (1) |
| GPL9020 |
Agilent-021169 Arabidopsis 4 Oligo Microarray (V4) (Feature Number version) |
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| Samples (29)
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| Relations |
| BioProject |
PRJNA292160 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE71828_60min_cytokinin.xlsx |
529.8 Kb |
(ftp)(http) |
XLSX |
| GSE71828_RAW.tar |
69.3 Mb |
(http)(custom) |
TAR (of TXT) |
| GSE71828_developmental_difference.xlsx |
1.2 Mb |
(ftp)(http) |
XLSX |
| Processed data included within Sample table |
| Processed data are available on Series record |
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