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Series GSE7286 Query DataSets for GSE7286
Status Public on Mar 27, 2007
Title Acute molecular responses to lengthening vs shortening muscle contractions
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To help elucidate mechanistic differences between lengthening and shortening muscle contractions we compared changes in gene expression within 24 h of an acute bout of each type of contraction in the quadriceps. Three healthy young men performed shortening contractions with one leg while the contralateral leg performed lengthening contractions. Biopsies were taken from both legs before exercise, 3, 6, and 24 h afterwards. Expression profiling was performed using a custom-made Affymetrix MuscleChip containing probesets of approximately 3,300 known genes and ESTs expressed in skeletal muscle. We identified 49 genes differentially regulated between the lengthening and shortening contractions. Using unsupervised hierarchical clustering, we identified four distinct clusters, three of which corresponded to unique functional categories (protein synthesis, stress response/early growth, and sarcolemmal structure). The results suggest distinct molecular pathways as early as 3 h post exercise. The molecular differences might contribute to mechanisms underlying the physiological adaptations seen with training using the two modes of exercise.
Keywords: Time Series Design
 
Overall design The hypothesis of the current study was that genes involved in hypertrophy will be differentially regulated between the two types of contractions.
 
Contributor(s) Chen Y
Citation(s) 17519359
Submission date Mar 15, 2007
Last update date Oct 01, 2019
Contact name Eric P Hoffman
E-mail(s) ericphoffman@gmail.com
Organization name Binghamton University - SUNY
Department Pharmaceutical Sciences
Street address PO Box 6000
City Binghamton
State/province NY
ZIP/Postal code 13902
Country USA
 
Platforms (1)
GPL246 Affymetrix GeneChip Custom-Made Muscle Chip
Samples (24)
GSM175541 MRenni-24hExercise-2LMC-s2
GSM175576 MRenni-24hExercise-1LMC-s2
GSM175577 MRenni-24hExercise-1RMC-s2
Relations
BioProject PRJNA97975

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE7286_RAW.tar 29.7 Mb (http)(custom) TAR (of CEL)

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