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Series GSE74121 Query DataSets for GSE74121
Status Public on Oct 15, 2018
Title Transcriptome analysis of E. coli and P. aeruginosa expressing endolysin wild type and mutant in vivo
Organisms Pseudomonas aeruginosa; Escherichia coli
Experiment type Expression profiling by high throughput sequencing
Summary We report the different bactericidal ability of endolysin wild type and mutant and explain the pathway of lipopolysaccharide biosynthesis is the dominant factor.
 
Overall design Endolysin wild type and mutant were expressed in E. coli TOP10 and P. aeruginosa PAO1, respectively
 
Contributor(s) Liu W, Xu F
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Submission date Oct 19, 2015
Last update date May 15, 2019
Contact name Fei Xu
E-mail(s) fxu@zju.edu.cn
Organization name Zhejiang Academy of Agricultural Sciences
Street address 198 Shiqiao Road
City Hangzhou
ZIP/Postal code 310021
Country China
 
Platforms (2)
GPL14548 Illumina HiSeq 2000 (Escherichia coli)
GPL18644 Illumina HiSeq 2000 (Pseudomonas aeruginosa)
Samples (6)
GSM1910812 WT control in E. coli
GSM1910813 WT endolysin expressed in E. coli
GSM1910814 Mutant endolysin expressed in E. coli
Relations
BioProject PRJNA299113
SRA SRP064955

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE74121_Ec_exp.txt.gz 84.3 Kb (ftp)(http) TXT
GSE74121_Pa_exp.txt.gz 111.3 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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