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Status |
Public on Jun 10, 2016 |
Title |
Sigma38 binding sites in E. Coli |
Organism |
Escherichia coli str. K-12 substr. MG1655 |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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Summary |
ChIP-seq to identify sigma38 binding sites in wild-type and delta ssrS (6S RNA knockout) strains of E. Coli K-12 MG1655, during stationary phase
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Overall design |
ChIP-seq using antibody against sigma38 in wild-type and ssrS deletion strain. Two replicates for wild type and one replicate for ssrS deletion.
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Contributor(s) |
Lal A, Seshasayee A |
Citation missing |
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Submission date |
Nov 09, 2015 |
Last update date |
May 15, 2019 |
Contact name |
Avantika Lal |
E-mail(s) |
avantika@ncbs.res.in
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Organization name |
National Centre for Biological Sciences
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Street address |
GKVK, Bellary Road
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City |
Bangalore |
ZIP/Postal code |
560065 |
Country |
India |
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Platforms (1) |
GPL21117 |
Illumina NextSeq 500 (Escherichia coli str. K-12 substr. MG1655) |
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Samples (6)
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Relations |
BioProject |
PRJNA301623 |
SRA |
SRP065973 |