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Series GSE75623 Query DataSets for GSE75623
Status Public on Dec 04, 2015
Title Aneuploidy shortens replicative lifespan in Saccharomyces cerevisiae
Organism Saccharomyces cerevisiae
Experiment type Genome variation profiling by genome tiling array
Summary Aneuploidy and aging are correlated; however, a causal link between these two phenomena has remained elusive. Here we show that yeast disomic for a single native yeast chromosome generally have a decreased replicative lifespan. In addition, the extent of this lifespan deficit correlates with the size of the extra chromosome. We identified a mutation in BUL1 that rescues both the lifespan deficit and a protein trafficking defect in yeast disomic for chromosome 5. Bul1 is an E4 ubiquitin ligase adaptor involved in a protein quality-control pathway that targets membrane proteins for endocytosis and destruction in the lysosomal vacuole thereby maintaining protein homeostasis. Concurrent suppression of the aging and trafficking phenotypes suggests that disrupted membrane protein homeostasis in aneuploid yeast may contribute to their accelerated aging. The data reported here demonstrate that aneuploidy can impair protein homeostasis, shorten lifespan, and may contribute to age-associated phenotypes.
 
Overall design These are all CGH arrays comparing DNA content between the indicated strain of interest and a wt control.
Web link https://puma.princeton.edu/cgi-bin/exptsets/viewExptSets.pl?exptset_no=7205
 
Contributor(s) Sunshine A, Dunham MJ
Citation(s) 26762766
Submission date Dec 02, 2015
Last update date Feb 15, 2018
Contact name Maitreya J. Dunham
E-mail(s) maitreya@uw.edu
Phone 206-543-2338
Organization name University of Washington
Department Genome Sciences
Lab Dunham Lab
Street address Foege Building, S403B, Box 355065
City Seattle
State/province WA
ZIP/Postal code 98195-5065
Country USA
 
Platforms (1)
GPL4131 Agilent-014810 Yeast Whole Genome ChIP-on-Chip Microarray 4x44K (G4493A)
Samples (24)
GSM1960654 chr 5 disome
GSM1960655 chr 5 disome evolved clone 2
GSM1960656 YMD285 x YMD2566 zygote 2 segregant 10A
Relations
BioProject PRJNA305028

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE75623_RAW.tar 110.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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