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Series GSE76350 Query DataSets for GSE76350
Status Public on Feb 15, 2017
Title Central nervous system muscarinic receptor type-1 primes HSC mobilization from bone marrow via glucocorticoid-mediated relay
Organism Mus musculus
Experiment type Expression profiling by array
Summary Here we show that muscarinic type-1 (Chrm1) signaling in the central nervous system (CNS) promotes G-CSF-elicited HSC migration from the BM. Blockade of Chrm1 in the CNS, but not the periphery, reduced HSC mobilization. In Chrm1−⁄− mice, reduced mobilization was rescued by wild-type parabionts, suggesting the contribution of a soluble factor. We found that corticosterone levels were dramatically reduced in the BM, and its exogenous administration normalized the mobilization deficit of Chrm1−⁄− animals. Chrm1−⁄− HSCs have reduced nuclear glucocorticoid receptors (Nr3c1) and alterations in the expression of actin-organizing molecules. Polymerized actin formation and HSC mobilization are also impaired in mice harboring Nr3c1-deficient hematopoietic cells.
 
Overall design RNA for microarray analysis was isolated by sorting HSC (Lineage-Sca1+cKit+Flt3- directly into RLT buffer from the RNeasy Plus Micro kit (Qiagen) according to the manufacturer’s instructions. Amplification and subsequent microarray was performed by the Genomics Core Facility at Albert Einstein College of Medicine using the One-Direct RNA amplification system (NuGEN) and GeneChip mouse gene 2.0 ST array (Affymetrix). Analysis was performed by first processing the chip through Transcriptome analysis center (TAC) software (Affymetrix) to determine fold changes and p-values which were then analyzed by gene set enrichment analysis (GSEA).
 
Contributor(s) Pierce H, Magnon C, Lucas D, Huggins M, Schwartz GJ, Frenette PS
Citation(s) 28196601
Submission date Dec 27, 2015
Last update date Aug 29, 2019
Contact name Halley C Pierce
E-mail(s) halley.c.ketchum@phd.einstein.yu.edu
Organization name Albert Einstein College of Medicine
Department Ruth L. and David S. Gottesman Stem Cell Institutue
Lab Paul Frenette
Street address 1301 Morris Park Ave.
City Bronx
State/province NY
ZIP/Postal code 10461
Country USA
 
Platforms (1)
GPL16570 [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
Samples (6)
GSM1981995 HSC_WT_1
GSM1981996 HSC_WT_2
GSM1981997 HSC_WT_3
Relations
BioProject PRJNA307066

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Supplementary file Size Download File type/resource
GSE76350_RAW.tar 57.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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