|
| Status |
Public on Jul 20, 2016 |
| Title |
Biological characterization of virulent therapeutic bacteriophage PAK_P3 infecting Pseudomonas aeruginosa. |
| Organisms |
Pseudomonas aeruginosa; Pseudomonas phage PAK_P3 |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We have isolated and characterized several bacteriophages infecting Pseudomonas aeruginosa distantly related to Felix O1 virus and proposed they form a new subfamily named Felixounavirinae. The infectious cycle of bacteriophages belonging to this subfamily has not been studied yet in terms of gene expression. The present study reports the RNA-Seq analysis of bacteriophage PAK_P3 infecting PAK strain of P. aeruginosa.
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| |
|
| Overall design |
RNA profile of Host and Phage at 0min, 3.5min and 13 min after infection of Pseudomonas aeruginosa PAK strain with the Pseudomonas phage PAK P3. Three biological replicates for each time point.
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| |
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| Contributor(s) |
Chevallereau A, Monot M, Blasel B |
| Citation(s) |
27380413 |
| |
| Submission date |
Jan 04, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Monot Marc |
| E-mail(s) |
mmonot@pasteur.fr
|
| Phone |
+33145688390
|
| Organization name |
Institut Pasteur
|
| Department |
Genomes and Genetics
|
| Lab |
Biomics
|
| Street address |
25, rue du docteur roux
|
| City |
Paris |
| ZIP/Postal code |
75015 |
| Country |
France |
| |
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| Platforms (2) |
| GPL18644 |
Illumina HiSeq 2000 (Pseudomonas aeruginosa) |
| GPL21295 |
Illumina HiSeq 2000 (Pseudomonas phage PAK_P3) |
|
| Samples (12)
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|
| Relations |
| BioProject |
PRJNA307603 |
| SRA |
SRP068063 |
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