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| Status |
Public on Feb 19, 2018 |
| Title |
Comparative transcriptional profiling of Arabidopsis CA-YDA line and wild-type plants after infection with Plectosphaerella cucumerina |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
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| Summary |
Comparative transcriptomic analysis of Arabidopsis thaliana lines expressing a constitutively active YDA protein (CA-YDA; in La-0 background), and wild-type plants (La-0) non-infected or infected with the necrotrophic fungal pathogen Plectosphaerella cucumerina BMM (PcBMM)
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| Overall design |
Gene expression was measured in 18-days old Arabidopsis thaliana plants expressing a constitutively active YDA protein (CA-YDA) and in wild-type plants (La-0) at 1 day after inoculation (1 dpi) with P. cucumerina BMM (PcBMM) or after treatment with water (non-infected or mock treatment). Three independent experiments were performed.
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| Contributor(s) |
Sopeña-Torres S, Jordá L, Sánchez-Rodríguez C, Miedes E, Escudero V, Swami S, López G, Pislewska-Bednarek M, Lassowskat I, Lee J, Gu Y, Haigis S, Alexander D, Pattathil S, Muñoz-Barrios A, Bednarek P, Somerville S, Schulze-Lefert P, Hahn MG, Scheel D, Molina A |
| Citation(s) |
29451312 |
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| Submission date |
Mar 09, 2016 |
| Last update date |
Feb 21, 2018 |
| Contact name |
Sara Sopeña Torres |
| E-mail(s) |
sara.storres@upm.es
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| Organization name |
Centro de Biotecnologia y Genomica de Plantas (UPM-INIA)
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| Street address |
Campus Montegancedo - Autovia M40 km.38
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| City |
Madrid |
| ZIP/Postal code |
28223 |
| Country |
Spain |
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| Platforms (1) |
| GPL9020 |
Agilent-021169 Arabidopsis 4 Oligo Microarray (V4) (Feature Number version) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA314761 |
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