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Series GSE79507 Query DataSets for GSE79507
Status Public on Jan 24, 2017
Title RNA-Sequencing for Additional Molar Germs Transcriptomes at Stages of Early Development in Miniature Pigs
Organism Sus scrofa
Experiment type Expression profiling by high throughput sequencing
Summary The molecular mechanisms of the regulatory network of mRNAs and long non-coding RNAs during sequential formation of additional molars remain poorly characterized in diphyodont mammals. The diphyodont miniature pig has proved to be a valuable model for studying human molar morphogenesis. Here, we performed RNA-seq on miniature pigs at three molar developmental stages to examine their differential gene expression profiles and potential regulatory networks during additional molar morphogenesis. Many new unannotated genes plus putative long non-coding RNAs were identified. Our data provide fundamental knowledge and a basis for understanding the molecular mechanisms governing cascade initiation of additional molars.
 
Overall design Additional molar germs mRNA profiles from early developmental stages at E50, E60 and E70 in Miniature pigs' were generated by deep sequencing using Illumina Hiseq 2000
 
Contributor(s) Wang S, Wang F
Citation(s) 28187707
Submission date Mar 22, 2016
Last update date Nov 19, 2019
Contact name Fu Wang
Organization name Capital Medical University
Street address Tian Tan Xi Li No.4, P. R. China
City Beijing
ZIP/Postal code 100050
Country China
 
Platforms (1)
GPL11429 Illumina HiSeq 2000 (Sus scrofa)
Samples (5)
GSM2096453 E50
GSM2096454 E60
GSM2096455 E70 rep1
Relations
BioProject PRJNA316011
SRA SRP072192

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79507_miniPig.combined.fa.gz 20.1 Mb (ftp)(http) FA
GSE79507_minipig.txt.gz 3.0 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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