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Series GSE81110

Query DataSets for GSE81110

Status

Public on May 05, 2016

Title

Classifying the Canine B-cell Lymphoma Cell line CLBL1

Organism

Canis lupus familiaris

Experiment type

Expression profiling by array
Third-party reanalysis

Summary

In 2013, Richards, et al. reported in Cancer Research that canine b-cell lymphomas could be subclassificed by gene expression profiling as ABC-like or GCB-like, similar to their human diffuse large B-cell lymphomas. This study, therefore, sought to classify the cell line CLBL1 as either GCB or ABC.

Overall design

We downloaded supplementary microarray data (GSE43664) from GEO and then merged the microarray data for CLBL1 and processed the combined data using the robust multiarray averaging (RMA) method in version 3.1.2 of the R statistical programming environment.

Contributor(s)

Harrington B, Kisseberth W

Citation missing

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Submission date

May 04, 2016

Last update date

May 07, 2016

Contact name

Bonnie Kate Harrington

E-mail(s)

harrington.120@osu.edu

Organization name

Ohio State University

Street address

410 W 12 Ave

City

Columbus

State/province

ZIP/Postal code

43210

Country

USA

Platforms (1)

GPL3738

[Canine_2] Affymetrix Canine Genome 2.0 Array

Samples (1)

GSM2143059

CLBL1

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BioProject

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE81110_RAW.tar	3.9 Mb	(http)(custom)	TAR (of CEL, CHP)
GSE81110_allSamples.txt.gz	13.4 Mb	(ftp)(http)	TXT
Processed data included within Sample table