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Series GSE81542 Query DataSets for GSE81542
Status Public on Dec 13, 2016
Title Nuclear mRNA quality control is bypassed for rapid export of stress responsive transcripts [RNA-Seq]
Organism Saccharomyces cerevisiae
Experiment type Other
Summary Comparative analyses of Mex67 and Npl3 binding to mRNA at normal growth condition (25°C) and upon shift to heat stress (30 min, 42°C).
 
Overall design Examination of two biological RNA Co-IP replicates of Mex67, Npl3 and no tag control at 25°C and upon shift to 30 min at 42°C (Heat stress) and subsequent Illumina RNA deep-sequencing
 
Contributor(s) Lingner T, Hackmann A, Salinas-Riester G, Krebber H
Citation(s) 27951587
Submission date May 17, 2016
Last update date May 15, 2019
Contact name Gabriela Salinas
E-mail(s) Gabriela.Salinas-Riester@medizin.uni-goettingen.de
Organization name Universitaetsmedizin Goettingen
Department Department of Pathology
Lab NGS Integrative Genomics
Street address Kreuzbergring 57
City Goettingen
State/province Lower-Saxony
ZIP/Postal code 37075
Country Germany
 
Platforms (1)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (12)
GSM2157030 36EV1US (No tag control 25°C)
GSM2157031 36EV2US (No tag control 25°C)
GSM2157032 157EV1US (Npl3 IP 25°C)
Relations
BioProject PRJNA321913
SRA SRP075293

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE81542_RAW.tar 330.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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