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| Status |
Public on Jun 03, 2016 |
| Title |
Expression data of lymphoblastoid B-cell line (LCL), T-cell, dermal fibroblast (DF), and iPSCs established from them. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
Recent studies indicated that iPSCs retain an epigenetic memory relating to their cell of origin that affected their properties and their functions as PSCs.
Then, we used microarrays to detail the global programme of gene expression reflecting the effect of cell type of origin, and carefully compared the characteristics of iPSCs from LCL, T-cell, and DF based on their expression profiles .
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| Overall design |
We isolated RNA from LCL, T-cell, DF, and iPSC generated from them (total 12 samples) for the gene expression microarray analysis. All of the iPSC lines we used were low passage number (less than 15).
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| Contributor(s) |
Fujimori K, Tezuka T, Akamatsu W, Okano H |
| Citation(s) |
27716287 |
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| Submission date |
Jun 02, 2016 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Koki Fujimori |
| E-mail(s) |
koh0909@a3.keio.jp
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| Organization name |
Keio University
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| Department |
Physiology
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| Street address |
35 Shinanomachi
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| City |
Sinjuku-ku, Tokyo |
| ZIP/Postal code |
160-8582 |
| Country |
Japan |
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| Platforms (1) |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA324237 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE82159_RAW.tar |
55.2 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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