GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE83577 Query DataSets for GSE83577
Status Public on Jan 01, 2017
Title Genome-wide Transcriptome Analysis of CD36 Overexpression in HepG2.2.15 Cells to Explore Its Regulation Role of Metabolism and HBV Life Cycle
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To understand the molecular basis underlying the response to increasing CD36 overexpression in HepG2.2.15 cell, we performed genome-wide sequencing of the mRNAs from HepG2.2.15-CD36OE cell and HepG2.2.15-vector cell using the RNA-seq technology to detect its differential transcriptomic profile.
Overall design To better understand the molecular changes in the response of the CD36 overexpression in HepG2.2.15 cell, three cDNA libraries from HepG2.2.15-vector cell (Vector-1, Vector-2, Vector-3) and HepG2.2.15-CD36 overexpression cell (CD36OE-1, CD36OE-2, CD36OE-3) were constructed, respectively. After ensuring quality control, Ion ProtonTM Sequencer was used for sequencing the cDNA libraries.
Contributor(s) Huang J, Chen Y
Citation(s) 27749922
Submission date Jun 21, 2016
Last update date May 15, 2019
Contact name 健 黄
Phone 15086067610
Organization name 遵义医学院附属医院
Street address 汇川区大连路149号遵义医学院附属医院
City 遵义市
State/province 贵州省
ZIP/Postal code 563003
Country China
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (6)
GSM2209815 Vector-1
GSM2209816 Vector-2
GSM2209817 Vector-3
BioProject PRJNA326403
SRA SRP076864

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83577_All_Counts.txt.gz 356.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap