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Series GSE83680 Query DataSets for GSE83680
Status Public on Nov 18, 2016
Title Combined transcriptional profiling during systemic candidiasis reveals organ-specific host-pathogen interactions [mouse tissues 12,24,72 h]
Organism Mus musculus
Experiment type Expression profiling by array
Summary The opportunistic fungal pathogen Candida albicans is a common cause of life-threatening nosocomial bloodstream infections. In the murine model of systemic candidiasis the kidney is the primary target organ while the fungal load declines over time in liver and spleen. To get a better understanding of the organ-specific differences in host-pathogen interaction during systemic murine candidiasis, we performed a time-course gene expression profiling to investigate the differential responses of murine kidney, liver and spleen and determined the fungal transcriptome in liver and kidney. We clearly demonstrate a delayed immune response on the transcriptional level in kidney accompanied by late induction of fungal stress response genes in this organ. In contrast, early upregulation of the proinflammatory response in the liver was associated with a fungal transcriptional profile resembling that of phagocytosed cells, suggesting that the resident phagocytic system contributes significantly to fungal control in the liver. Although no visible filamentation occurred in the liver, C. albicans hypha-associated genes were upregulated, indicating an uncoupling of gene expression and morphology during infection of this organ. In vitro the induction of hypha-associated gene expression in yeast cells led to altered interaction with macrophages, suggesting that the observed transcriptional changes affect host-pathogen interaction in vivo. Consistently, the combination of host and pathogen transcriptional data in an inference network model implied that C. albicans cell wall remodeling and metabolism were connected to the immune responses in kidney and liver. Furthermore, the network suggested links between fungal iron acquisition and amino acid metabolism in the kidney and host organ homeostasis. Thus, this work provides novel insights into the organ-specific host-pathogen interactions during systemic C. albicans infection.
 
Overall design 54 mouse samples, time points: 12h, 24, 72h post infection with Candida albiacns, PBS control included
 
Contributor(s) Hebecker B, Vlaic S, Bauer M, Brunke SO, Conrad T, Linde J, Hube B, Jacobsen ID
Citation(s) 27808111
Submission date Jun 23, 2016
Last update date Jun 14, 2018
Contact name Ilse Denise Jacobsen
E-mail(s) ilse.jacobsen@hki-jena.de
Phone +49 3641 5321223
Organization name Leibniz Institute for Natural Product Research and Infection Biology
Lab Microbial Immunology
Street address Beutenbergstr. 11a
City Jena
ZIP/Postal code 07745
Country Germany
 
Platforms (1)
GPL6885 Illumina MouseRef-8 v2.0 expression beadchip
Samples (54)
GSM2212525 kidney-systemic_fungal_infection-12h-rep1
GSM2212526 kidney-systemic_fungal_infection-12h-rep2
GSM2212527 kidney-systemic_fungal_infection-12h-rep3
This SubSeries is part of SuperSeries:
GSE83682 Combined transcriptional profiling during systemic candidiasis reveals organ-specific host-pathogen interactions
Relations
BioProject PRJNA326710

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83680_Non-normalized_data.txt.gz 5.5 Mb (ftp)(http) TXT
GSE83680_Normalized_data_with_array_address_ID.txt.gz 9.4 Mb (ftp)(http) TXT
GSE83680_QC_allChips_Sample_Probe_Profile.txt.gz 15.8 Mb (ftp)(http) TXT
GSE83680_RAW.tar 3.1 Mb (http)(custom) TAR
GSE83680_TableControl_probes_MRefSeq8_1.txt.gz 194.6 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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