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GEO accession:
Series GSE85070
Query DataSets for GSE85070
Status
Public on Jan 11, 2017
Title
Comparative mRNA and sRNA transcriptome analysis of TCV-infected wildtype and dcl1-9 mutant Arabidopsis thaliana
Organism
Arabidopsis thaliana
Experiment type
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
27782158
Submission date
Aug 01, 2016
Last update date
May 15, 2019
Contact name
Chao Wu
E-mail(s)
wuchao@u.nus.edu
Phone
+6565168803
Organization name
National University of Singapore
Department
Department of Biological Sciences
Lab
Prof. Wong Sek Man
Street address
21 Lower Kent Ridge Road
City
Singapore
ZIP/Postal code
119077
Country
Singapore
Platforms (1)
GPL13222
Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (24)
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GSM2257303
mock wildtype replicate 1
GSM2257304
mock wildtype replicate 2
GSM2257305
mock wildtype replicate 3
GSM2257306
TCV infected wildtype replicate 1
GSM2257307
TCV infected wildtype replicate 2
GSM2257308
TCV infected wildtype replicate 3
GSM2257309
mock mutant replicate 1
GSM2257310
mock mutant replicate 2
GSM2257311
mock mutant replicate 3
GSM2257312
TCV infected mutant replicate 1
GSM2257313
TCV infected mutant replicate 2
GSM2257314
TCV infected mutant replicate 3
GSM2257315
mock wildtype replicate 1_sRNA
GSM2257316
mock wildtype replicate 2_sRNA
GSM2257317
mock wildtype replicate 3_sRNA
GSM2257318
TCV infected wildtype replicate 1_sRNA
GSM2257319
TCV infected wildtype replicate 2_sRNA
GSM2257320
TCV infected wildtype replicate 3_sRNA
GSM2257321
mock mutant replicate 1_sRNA
GSM2257322
mock mutant replicate 2_sRNA
GSM2257323
mock mutant replicate 3_sRNA
GSM2257324
TCV infected mutant replicate 1_sRNA
GSM2257325
TCV infected mutant replicate 2_sRNA
GSM2257326
TCV infected mutant replicate 3_sRNA
This SuperSeries is composed of the following SubSeries:
GSE85067
Comparative transcriptome analysis of TCV-infected wildtype and dcl1-9 mutant Arabidopsis thaliana
GSE85069
Comparative sRNA-Seq analysis of TCV-infected wildtype and dcl1-9 mutant Arabidopsis thaliana
Relations
BioProject
PRJNA336052
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE85070_RAW.tar
1.6 Mb
(http)
(custom)
TAR (of TXT)
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