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| Status |
Public on Oct 31, 2017 |
| Title |
Role of 14-3-3 in the transcriptional response of Saccharomyces cerevisiae to potassium starvation. |
| Organism |
Saccharomyces cerevisiae |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We investigated the transcriptional response of yeast Saccharomyces cerevisiae bmh1 and bmh2 deletion mutants to potassium starvation. To this end yeast strains were grown for 60 min in media without potassium or in media with a standard potassium concentration (50 mM KCl). Using Serial Analysis of Gene Expression (SAGE)-tag sequencing the effect of potassium starvation on the transcriptome was determined. This study is a follow-up of our previous study (Anemaet IG and van Heusden GPH. 2014. BMC Genomics:1040)( GEO accession number GSE57093).
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| Overall design |
3 samples of cells grown in media without potassium and 3 samples of cells grown in the presence of potassium were analyzed.
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| Contributor(s) |
van Heusden GP |
| Citation(s) |
28877665 |
| Submission date |
Aug 12, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Paul van Heusden |
| E-mail(s) |
g.p.h.van.heusden@biology.leidenuniv.nl
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| Phone |
31 71 5274996
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| Organization name |
Leiden University
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| Department |
Institute of Biology
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| Street address |
Sylviusweg 72
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| City |
Leiden |
| ZIP/Postal code |
2333BE |
| Country |
Netherlands |
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| Platforms (1) |
| GPL13821 |
Illumina HiSeq 2000 (Saccharomyces cerevisiae) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA338803 |
| SRA |
SRP081576 |
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