NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE87095 Query DataSets for GSE87095
Status Public on Jun 09, 2017
Title DNA methylation analysis of B cells in Rheumatoid Arthritis
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary This study performed a genome-wide methylation analysis of positively isolated CD19+ B cells in rheumatoid arthritis (RA) and healthy controls. The Ilumina HumanMethylation450 BeadChip was uset to obtain the methylation levels at >400,000 CpG sites. Samples include 49 RA patients and 73 healthy controls.
 
Overall design Bisulphite converted DNA from the 122 samples were hybridised to the Illumina HumanMethylation450 BeadChip. Methylation levels at each CpG site were compared between RA patients and controls, as well as at a pathway-level.
 
Contributor(s) Julià A, Marsal S
Citation(s) 28475762
Submission date Sep 19, 2016
Last update date Mar 22, 2019
Contact name Antonio Julià
E-mail(s) toni.julia@vhir.org
Phone +34 934029082
Organization name Vall d'Hebron Hospital Research Institute
Department Rheumatology Research Group
Lab Rheumatology Research Group
Street address c/ Baldiri Reixac nº15
City Barcelona
State/province Barcelona
ZIP/Postal code 08028
Country Spain
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (122)
GSM2322079 genomic DNA from purified CD19+ B cells TJITB2
GSM2322080 genomic DNA from purified CD19+ B cells TJITB3
GSM2322081 genomic DNA from purified CD19+ B cells TJITB4
Relations
BioProject PRJNA343481

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE87095_RAW.tar 1.2 Gb (http)(custom) TAR (of IDAT)
Processed data included within Sample table
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap