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Series GSE87579 Query DataSets for GSE87579
Status Public on Nov 15, 2016
Title Conversion of terminally committed mouse hepatocytes to culturable bipotent progenitor cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary A challenge for advancing approaches to liver regeneration is loss of functional differentiation capacity when hepatocyte progenitors are maintained in culture. Recent lineage-tracing studies have shown that mature hepatocytes (MHs) convert to an immature state during chronic liver injury, and we investigated whether this conversion could be recapitulated in vitro and if such converted cells could represent a source of expandable hepatocytes. We report that a cocktail of small molecules, Y-27632, A-83-01 and CHIR99021, can convert rat and mouse MHs in vitro into proliferative bipotent cells, which we term chemically induced liver progenitors (CLiPs). CLiPs can differentiate into both MHs and biliary epithelial cells that can form functional ductal structures. CLiPs in long-term culture did not lose their proliferative capacity or their hepatic differentiation ability, and rat CLiPs were shown to extensively repopulate chronically injured liver tissue. Thus our study advances the goals of liver regenerative medicine.
Transcriptomic analysis for mouse CLiPs at P1 which underwent hepatic induction (Matrix 1). Transcriptomic analysis for mouse CLiPs at P11-12 which underwent hepatic induction (Matrix 2).
 
Overall design Hepatic induction was performed for P1 mouse CLiPs or CLiPs that underwent 11-12 passages.
 
Contributor(s) Katsuda T, Ochiya T
Citation(s) 27840021
Submission date Oct 03, 2016
Last update date Mar 22, 2017
Contact name Takeshi Katsuda
E-mail(s) tkatsuda412@gmail.com
Phone +1-215-746-5559
Organization name University of Pennsylvania
Department Perelman School of Medicine
Lab Gastroenterology Division
Street address 421 Curie Blvd, BRB II/III Rm531
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL21163 Agilent-074809 SurePrint G3 Mouse GE v2 8x60K Microarray [Probe Name version]
Samples (21)
GSM2334727 Mouse_Fresh_Hep_1
GSM2334728 Mouse_Fresh_Hep_2
GSM2334729 Mouse_Fresh_Hep_3
This SubSeries is part of SuperSeries:
GSE87764 Chemical induction of liver progenitor cells from mature hepatocytes
Relations
BioProject PRJNA345376

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE87579_RAW.tar 191.7 Mb (http)(custom) TAR (of TXT)
GSE87579_matrix1.txt.gz 3.3 Mb (ftp)(http) TXT
GSE87579_matrix2.txt.gz 2.4 Mb (ftp)(http) TXT
Processed data are available on Series record

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