|
| Status |
Public on Jan 18, 2017 |
| Title |
The genome-wide transcriptional response to varying RpoS levels in Escherichia coli. |
| Organism |
Escherichia coli |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We varied RpoS levels using a mutation or an arabinose-inducible RpoS construct during stationary phase in rich media. We then sequenced cDNA from three separate RpoS levels, corresponding to 0%, 26% and 100% of wild-type levels.
|
| |
|
| Overall design |
Two replicates at each of the three RpoS levels.
|
| |
|
| Contributor(s) |
Stoebel DM |
| Citation(s) |
28115545 |
| |
| Submission date |
Oct 11, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Daniel Stoebel |
| E-mail(s) |
stoebel@g.hmc.edu
|
| Organization name |
Harvey Mudd College
|
| Department |
Biology
|
| Street address |
301 Platt Blvd
|
| City |
Claremont |
| State/province |
CA |
| ZIP/Postal code |
91711 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL14548 |
Illumina HiSeq 2000 (Escherichia coli) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA347862 |
| SRA |
SRP091400 |
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