GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE95824 Query DataSets for GSE95824
Status Public on Jul 17, 2017
Title Assessment of the Pol IV largest subunit, NRPD1, DeCL domain deletion construct to rescue Pol IV-dependent siRNAs in the nrpd1-3 mutant (sRNA).
Organism Arabidopsis thaliana
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary The Arabidopsis thaliana multi-subunit RNA Polymerase IV largest subunit DeCL domain was functionally assessed with an NRPD1 DeCL domain deletion construct.
Overall design The Pol IV largest subunit DeCL domain deletion mutant, nrpd1 ΔDeCL, was assessed for sRNA expression across 24 nt siRNA clusters
Contributor(s) Wendte JM, Pikaard CS
Citation(s) 31329950
Submission date Mar 08, 2017
Last update date Oct 01, 2019
Contact name Jered Wendte
Organization name Indiana University
Street address 915 E. 3rd Street
City Bloomington
State/province IN
ZIP/Postal code 47405
Country USA
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (8)
GSM2526534 Col_rep1
GSM2526535 nrpd1-3_rep1
GSM2526536 nrpd1dDeCL_rep1
This SubSeries is part of SuperSeries:
GSE95825 Functional analysis of the Pol IV DeCL domain
BioProject PRJNA378529
SRA SRP101572

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE95824_RAW.tar 560.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap