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Sample GSM1024030 Query DataSets for GSM1024030
Status Public on Dec 01, 2013
Title 3xbhlh Rep3
Sample type RNA
 
Source name 3xbhlh Rep3
Organism Arabidopsis thaliana
Characteristics age: 6 day
tissue: seedling
genotype: 3xbhlh KO
treatment: minus Fe
Treatment protocol exposed for 6 hours to 100 µM salicylic acid or mock treatment
Growth protocol 1/2 Hoagland medium without Fe; 6day-old seedlings
Extracted molecule total RNA
Extraction protocol Qiagen RNA purification kit
Label Cy3
Label protocol standard Agilent protocol by ATLAS Biolabs GmbH, Germany
 
Hybridization protocol standard Agilent protocol by ATLAS Biolabs GmbH, Germany
Scan protocol standard Agilent protocol by ATLAS Biolabs GmbH, Germany
Description Gene expression in whole 6 day-old 3xbhlh seedlings, -Fe
Data processing standard Agilent protocol by ATLAS Biolabs GmbH, Germany
 
Submission date Oct 23, 2012
Last update date Dec 01, 2013
Contact name Petra Bauer
E-mail(s) Petra.Bauer@uni-duesseldorf.de
Organization name Saarland University
Street address Campus A2.4
City Saarbrücken
ZIP/Postal code 66123
Country Germany
 
Platform ID GPL9020
Series (1)
GSE41774 Response of subgroup Ib 3xbhlh mutant and wild type at - Fe to +/- salicylic acid

Data table header descriptions
ID_REF
VALUE Agilent Feature Extraction default gProcessedSignal

Data table
ID_REF VALUE
1 1.93E+02
2 2.50E+00
3 2.52E+00
4 2.54E+00
5 5.20E+00
6 1.38E+01
7 8.83E+00
8 5.35E+00
9 5.69E+00
10 8.51E+00
11 6.99E+00
12 3.44E+01
13 8.42E+01
14 7.70E+02
15 1.37E+02
16 4.97E+01
17 2.64E+03
18 5.81E+03
19 5.06E+03
20 2.52E+02

Total number of rows: 45220

Table truncated, full table size 651 Kbytes.




Supplementary file Size Download File type/resource
GSM1024030_252116911244_201012090841_S01_GE1_107_Sep09_1_2.txt.gz 8.9 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file

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