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Sample GSM1047402 Query DataSets for GSM1047402
Status Public on Jul 29, 2013
Title Pilocytic astrocytoma [PA8]
Sample type RNA
 
Source name Paediartric brain tumour PA8
Organism Homo sapiens
Characteristics tissue: Pilocytic astrocytoma
grade: I
Sex: M
age: 1
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN miRNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label Cy3
Label protocol Cy3 Standard illumina prorocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in GenomeStudio
 
Submission date Nov 30, 2012
Last update date Jul 29, 2013
Contact name Denise Sheer
E-mail(s) d.sheer@qmul.ac.uk
Phone +442078822595
Organization name Barts & The London School of Medicine & Dentistry
Department Neuroscience & Trauma
Street address Blizard Institute, 4 Newark Street
City London
ZIP/Postal code E1 2AT
Country United Kingdom
 
Platform ID GPL6947
Series (2)
GSE42656 Gene expression profiles for paediatric brain tumours
GSE42658 Expression profiles for paediatric brain tumours

Data table header descriptions
ID_REF
VALUE quantile normalized
PA8.Detection Pval

Data table
ID_REF VALUE PA8.Detection Pval
ILMN_1343291 36874.43 0
ILMN_1343295 4828.176 0
ILMN_1651199 102.8187 0.6785244
ILMN_1651209 109.8969 0.4532279
ILMN_1651210 124.7292 0.115942
ILMN_1651221 112.2471 0.3926219
ILMN_1651228 3085.268 0
ILMN_1651229 310.2854 0
ILMN_1651230 107.3826 0.5322793
ILMN_1651232 146.4811 0.009222661
ILMN_1651235 128.3212 0.08300395
ILMN_1651236 112.7097 0.3754941
ILMN_1651237 115.6067 0.28722
ILMN_1651238 125.2278 0.1093544
ILMN_1651249 94.35505 0.8761528
ILMN_1651253 127.2551 0.09354414
ILMN_1651254 1519.787 0
ILMN_1651259 106.8425 0.5507246
ILMN_1651260 103.4196 0.6679842
ILMN_1651262 1724.592 0

Total number of rows: 48803

Table truncated, full table size 1425 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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