GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE42656
Query DataSets for GSE42656
Status
Public on Jul 29, 2013
Title
Gene expression profiles for paediatric brain tumours
Organism
Homo sapiens
Experiment type
Expression profiling by array
Summary
In this study, we screened a cohort of 57 paediatric brain tumours, with a wide range of pathologies to identify gene expression profiles
Overall design
We analysed gene expression in paediatric brain tumours as compared to normal adult brain in order to understand the molecular profiles. Our cohort included 14 pilocytic astrocytomas, 3 diffuse astrocytomas, 2 anaplastic astrocytomas, 5 glioblastomas, 14 ependymomas, 9 medulloblastomas, 5 atypical teratoid/rhabdoid tumours, 4 choroid plexus papillomas, 1 papillary glioneuronal, 8 adult brain and 8 foetal brain controls.
Contributor(s)
Sheer D
Citation(s)
23887970
Submission date
Nov 30, 2012
Last update date
Aug 16, 2018
Contact name
Denise Sheer
E-mail(s)
d.sheer@qmul.ac.uk
Phone
+442078822595
Organization name
Barts & The London School of Medicine & Dentistry
Department
Neuroscience & Trauma
Street address
Blizard Institute, 4 Newark Street
City
London
ZIP/Postal code
E1 2AT
Country
United Kingdom
Platforms (1)
GPL6947
Illumina HumanHT-12 V3.0 expression beadchip
Samples (73)
Less...
More...
GSM1047395
Pilocytic astrocytoma [PA1]
GSM1047396
Pilocytic astrocytoma [PA2]
GSM1047397
Pilocytic astrocytoma [PA3]
GSM1047398
Papillary glioneuronal [PGNT]
GSM1047399
Pilocytic astrocytoma [PA5]
GSM1047400
Pilocytic astrocytoma [PA6]
GSM1047401
Pilocytic astrocytoma [PA7]
GSM1047402
Pilocytic astrocytoma [PA8]
GSM1047403
Pilocytic astrocytoma [PA9]
GSM1047404
Pilocytic astrocytoma [PA10]
GSM1047405
Pilocytic astrocytoma [PA11]
GSM1047406
Pilocytic astrocytoma [PA12]
GSM1047407
Pilocytic astrocytoma [PA13]
GSM1047408
Pilocytic astrocytoma [PA14]
GSM1047409
Pilocytic astrocytoma [PA15]
GSM1047410
Diffuse astrocytoma [DA1]
GSM1047411
Diffuse astrocytoma [DA2]
GSM1047412
Diffuse astrocytoma [DA3]
GSM1047413
Anaplastic astrocytoma [AA1]
GSM1047414
Anaplastic astrocytoma [AA2]
GSM1047415
Glioblastoma [GBM1]
GSM1047416
Glioblastoma [GBM2]
GSM1047417
Glioblastoma [GBM3]
GSM1047418
Glioblastoma [GBM4]
GSM1047419
Glioblastoma [GBM5]
GSM1047420
Ependymoma [E1]
GSM1047421
Ependymoma [E2]
GSM1047422
Ependymoma [E3]
GSM1047423
Ependymoma [E4]
GSM1047424
Ependymoma [E5]
GSM1047425
Ependymoma [E6]
GSM1047426
Ependymoma [E7]
GSM1047427
Ependymoma [E8]
GSM1047428
Ependymoma [E9]
GSM1047429
Ependymoma [E10]
GSM1047430
Ependymoma [E11]
GSM1047431
Ependymoma [E12]
GSM1047432
Ependymoma [E13]
GSM1047433
Ependymoma [E14]
GSM1047434
Medulloblastoma [M1]
GSM1047435
Medulloblastoma [M2]
GSM1047436
Medulloblastoma [M3]
GSM1047437
Medulloblastoma [M4]
GSM1047438
Medulloblastoma [M5]
GSM1047439
Medulloblastoma [M6]
GSM1047440
Medulloblastoma [M7]
GSM1047441
Medulloblastoma [M8]
GSM1047442
Medulloblastoma [M9]
GSM1047443
Atypical teratoid/rhabdoid tumour [R1]
GSM1047444
Atypical teratoid/rhabdoid tumour [R2]
GSM1047445
Atypical teratoid/rhabdoid tumour [R3]
GSM1047446
Atypical teratoid/rhabdoid tumour [R4]
GSM1047447
Atypical teratoid/rhabdoid tumour [R5]
GSM1047448
Choroid plexus papilloma [P1]
GSM1047449
Choroid plexus papilloma [P2]
GSM1047450
Choroid plexus papilloma [P4]
GSM1047451
Choroid plexus papilloma [P3]
GSM1047452
Foetal Cerebellum [FC1]
GSM1047453
Foetal Cerebellum [FC2]
GSM1047454
Foetal Cerebellum [FC3]
GSM1047455
Foetal Cerebellum [FC4]
GSM1047456
Foetal Frontal Lobe [FC5]
GSM1047457
Foetal Frontal Lobe [FC6]
GSM1047458
Foetal Frontal Lobe [FC7]
GSM1047459
Foetal Frontal Lobe [FC8]
GSM1047460
Adult control cerebellum [AC1]
GSM1047461
Adult control frontal lobe [AC2]
GSM1047462
Adult control cerebellum [AC3]
GSM1047463
Adult control cerebellum [AC4]
GSM1047464
Adult control frontal lobe [AC5]
GSM1047465
Adult control frontal lobe [AC6]
GSM1047466
Adult control frontal lobe [AC7]
GSM1047467
Adult control cerebellum [AC8]
This SubSeries is part of SuperSeries:
GSE42658
Expression profiles for paediatric brain tumours
Relations
BioProject
PRJNA182519
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE42656_RAW.tar
6.2 Mb
(http)
(custom)
TAR
GSE42656_non_normalized_mRNA.txt.gz
21.8 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
Less...
More...