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Sample GSM1047442 Query DataSets for GSM1047442
Status Public on Jul 29, 2013
Title Medulloblastoma [M9]
Sample type RNA
 
Source name Paediartric brain tumour M9
Organism Homo sapiens
Characteristics tissue: Medulloblastoma
grade: IV
Sex: M
age: 4
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN miRNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label Cy3
Label protocol Cy3 Standard illumina prorocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in GenomeStudio
 
Submission date Nov 30, 2012
Last update date Jul 29, 2013
Contact name Denise Sheer
E-mail(s) d.sheer@qmul.ac.uk
Phone +442078822595
Organization name Barts & The London School of Medicine & Dentistry
Department Neuroscience & Trauma
Street address Blizard Institute, 4 Newark Street
City London
ZIP/Postal code E1 2AT
Country United Kingdom
 
Platform ID GPL6947
Series (2)
GSE42656 Gene expression profiles for paediatric brain tumours
GSE42658 Expression profiles for paediatric brain tumours

Data table header descriptions
ID_REF
VALUE quantile normalized
M9.Detection Pval

Data table
ID_REF VALUE M9.Detection Pval
ILMN_1343291 42155.05 0
ILMN_1343295 1792.573 0
ILMN_1651199 106.4342 0.541502
ILMN_1651209 140.5429 0.02898551
ILMN_1651210 120.1756 0.2187088
ILMN_1651221 120.8881 0.198946
ILMN_1651228 3420.897 0
ILMN_1651229 267.4818 0
ILMN_1651230 105.585 0.5586298
ILMN_1651232 170.6666 0.007905139
ILMN_1651235 139.872 0.02898551
ILMN_1651236 124.4938 0.14361
ILMN_1651237 158.185 0.01054018
ILMN_1651238 131.9524 0.05797102
ILMN_1651249 103.4906 0.6166008
ILMN_1651253 116.3487 0.2964427
ILMN_1651254 716.5577 0
ILMN_1651259 91.65537 0.8959157
ILMN_1651260 85.09488 0.9736496
ILMN_1651262 5240.352 0

Total number of rows: 48803

Table truncated, full table size 1448 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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