NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM106173 Query DataSets for GSM106173
Status Public on Sep 27, 2006
Title ALLREZ.P7
Sample type RNA
 
Source name bone marrow (freshly isolated mononuclear cells)
Organism Homo sapiens
Characteristics Age at relapse diagnosis [years]: 8.9
Sex: male
Immunophenotype: pre-B
Time of relapse: late
Site of relapse: isolated BM
ALL-REZ BFM risk group: intermediate (S2)
Peripheral blast count at relapse diagnosis per microliter: 11814
Minimal residual disease (after 2 induction cycles): high
Genetic features: not found
S and G2/M phase cells [%]: 5.42
Frontline therapy: ALL-BFM 95 MR
Extracted molecule total RNA
Label Biotin
 
Description first relapse acute lymphocytic leukemia
Data processing Probe level normalization: calibration and variance stabilization (Huber et al. PMID: 12169536). Probe-set summarization: median polish on the normalized data (Irrizary et al. PMID: 12582260).
 
Submission date Apr 21, 2006
Last update date Nov 14, 2018
Contact name Renate Kirschner-Schwabe
E-mail(s) R.Kirschner@charite.de
Phone +4930450566088
Fax +4930450566946
URL http://www.charite.de/paedonko
Organization name Charité - Universitätsmedizin Berlin
Department Pediatric Oncology/Hematology
Lab Molecular Genetics
Street address Augustenburger Platz 1
City Berlin
ZIP/Postal code 12167
Country Germany
 
Platform ID GPL96
Series (1)
GSE4698 Molecular characterization of very early relapsed childhood ALL
Relations
Reanalyzed by GSE122505

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsinh (log-like) scale

Data table
ID_REF VALUE
1007_s_at 3.273454800454
1053_at 2.21922799075719
117_at 1.92490353373115
121_at 3.54232279800567
1255_g_at 0.8920985425457
1294_at 3.08838101230215
1316_at 1.81895954809559
1320_at 1.30523679801660
1405_i_at 1.82858215485234
1431_at 0.920803432663637
1438_at 2.68285506814564
1487_at 2.62403859595774
1494_f_at 2.27932605441616
1598_g_at 3.23594373885298
160020_at 2.99479842036737
1729_at 2.28401872990286
1773_at 1.93076890807042
177_at 1.77721015332259
179_at 3.79148019352777
1861_at 1.96356202443253

Total number of rows: 22283

Table truncated, full table size 608 Kbytes.




Supplementary file Size Download File type/resource
GSM106173.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM106173.EXP.gz 490 b (ftp)(http) EXP

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap