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Sample GSM106175 Query DataSets for GSM106175
Status Public on Sep 27, 2006
Title ALLREZ.P9
Sample type RNA
 
Source name bone marrow (freshly isolated mononuclear cells)
Organism Homo sapiens
Characteristics Age at relapse diagnosis [years]: 7.7
Sex: male
Immunophenotype: common
Time of relapse: early
Site of relapse: isolated BM
ALL-REZ BFM risk group: high (S3)
Peripheral blast count at relapse diagnosis per microliter: 70
Minimal residual disease (after 2 induction cycles): NA
Genetic features: not found
S and G2/M phase cells [%]: NA
Frontline therapy: ALL-BFM 95 SR
Extracted molecule total RNA
Label Biotin
 
Description first relapse acute lymphocytic leukemia
Data processing Probe level normalization: calibration and variance stabilization (Huber et al. PMID: 12169536). Probe-set summarization: median polish on the normalized data (Irrizary et al. PMID: 12582260).
 
Submission date Apr 21, 2006
Last update date Nov 14, 2018
Contact name Renate Kirschner-Schwabe
E-mail(s) R.Kirschner@charite.de
Phone +4930450566088
Fax +4930450566946
URL http://www.charite.de/paedonko
Organization name Charité - Universitätsmedizin Berlin
Department Pediatric Oncology/Hematology
Lab Molecular Genetics
Street address Augustenburger Platz 1
City Berlin
ZIP/Postal code 12167
Country Germany
 
Platform ID GPL96
Series (1)
GSE4698 Molecular characterization of very early relapsed childhood ALL
Relations
Reanalyzed by GSE122505

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsinh (log-like) scale

Data table
ID_REF VALUE
1007_s_at 2.83652656799939
1053_at 2.95536392030845
117_at 1.92109378367187
121_at 3.59586385570422
1255_g_at 0.930576686042997
1294_at 3.41765231209825
1316_at 1.69507792042785
1320_at 1.42444012574465
1405_i_at 2.01678795321742
1431_at 0.914434522123522
1438_at 2.29714218208735
1487_at 2.73905373952891
1494_f_at 2.14799623147645
1598_g_at 3.34134517713827
160020_at 2.98669086137184
1729_at 2.58245883355127
1773_at 2.01601464044425
177_at 1.74379603308992
179_at 3.81481647011612
1861_at 2.07598302719308

Total number of rows: 22283

Table truncated, full table size 608 Kbytes.




Supplementary file Size Download File type/resource
GSM106175.CEL.gz 3.1 Mb (ftp)(http) CEL
GSM106175.EXP.gz 489 b (ftp)(http) EXP

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