|
| Status |
Public on Sep 27, 2006 |
| Title |
ALLREZ.P20 |
| Sample type |
RNA |
| |
|
| Source name |
bone marrow (freshly isolated mononuclear cells)
|
| Organism |
Homo sapiens |
| Characteristics |
Age at relapse diagnosis [years]: 14.1
Sex: male
Immunophenotype: common
Time of relapse: very early
Site of relapse: isolated BM
ALL-REZ BFM risk group: high (S4)
Peripheral blast count at relapse diagnosis per microliter: 1288
Minimal residual disease (after 2 induction cycles): NA
Genetic features: E2A-PBX1 positive
S and G2/M phase cells [%]: 17.78
Frontline therapy: COALL 06-97
|
| Extracted molecule |
total RNA |
| Label |
Biotin
|
| |
|
| Description |
first relapse acute lymphocytic leukemia
|
| Data processing |
Probe level normalization: calibration and variance stabilization (Huber et al. PMID: 12169536). Probe-set summarization: median polish on the normalized data (Irrizary et al. PMID: 12582260).
|
| |
|
| Submission date |
Apr 21, 2006 |
| Last update date |
Nov 14, 2018 |
| Contact name |
Renate Kirschner-Schwabe |
| E-mail(s) |
R.Kirschner@charite.de
|
| Phone |
+4930450566088
|
| Fax |
+4930450566946
|
| URL |
http://www.charite.de/paedonko
|
| Organization name |
Charité - Universitätsmedizin Berlin
|
| Department |
Pediatric Oncology/Hematology
|
| Lab |
Molecular Genetics
|
| Street address |
Augustenburger Platz 1
|
| City |
Berlin |
| ZIP/Postal code |
12167 |
| Country |
Germany |
| |
|
| Platform ID |
GPL96 |
| Series (1) |
| GSE4698 |
Molecular characterization of very early relapsed childhood ALL |
|
| Relations |
| Reanalyzed by |
GSE122505 |
