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GEO accession:
Sample GSM107843
Query DataSets for GSM107843
Status
Public on Dec 11, 2007
Title
1% Oxygen 16h
Sample type
RNA
Source name
1% 16h
Organism
Homo sapiens
Characteristics
Human aortic smooth muscle cells (HASMC)
Treatment protocol
HASMC cells exposed to hypoxia (1% O2 and 3% O2) for 16 or 48 hours, or normoxia
Extracted molecule
total RNA
Label
biotin
Description
standard affymetrix protocol using MAS5.0 algorithm from affymetrix
Data processing
arrays scaled to 150 intensity
Submission date
May 04, 2006
Last update date
Dec 11, 2007
Contact name
Sara Arab
Organization name
Toronto General Hospital
Department
Cardiology
Lab
M. Husain
Street address
610 University Avenue
City
Toronto
State/province
ONT
ZIP/Postal code
M5G 2M9
Country
Canada
Platform ID
GPL96
Series (1)
GSE4725
Hypoxia
Data table header descriptions
ID_REF
VALUE
intensity
Data table
ID_REF
VALUE
AFFX-BioB-5_at
347.3
AFFX-BioB-M_at
804.1
AFFX-BioB-3_at
268
AFFX-BioC-5_at
1216.3
AFFX-BioC-3_at
1082.5
AFFX-BioDn-5_at
1043.5
AFFX-BioDn-3_at
5241.1
AFFX-CreX-5_at
9789.2
AFFX-CreX-3_at
12768.7
AFFX-DapX-5_at
3.9
AFFX-DapX-M_at
23.1
AFFX-DapX-3_at
2.8
AFFX-LysX-5_at
7.3
AFFX-LysX-M_at
5.4
AFFX-LysX-3_at
13.9
AFFX-PheX-5_at
0.8
AFFX-PheX-M_at
1.2
AFFX-PheX-3_at
18.2
AFFX-ThrX-5_at
3.6
AFFX-ThrX-M_at
9
Total number of rows:
22283
Table truncated, full table size
345 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM107843.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
GSM107843.EXP.gz
474 b
(ftp)
(http)
EXP
Processed data included within Sample table
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