NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1186768 Query DataSets for GSM1186768
Status Public on May 19, 2014
Title Kidney-FD90-14A
Sample type RNA
 
Source name FD90
Organism Ovis aries
Characteristics tissue: Kidney
age: fetal day 90
Growth protocol All animal studies were approved by the NICHD/NIH Animal Care and Use Committee.
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Data processing RMA by software Partek
 
Submission date Jul 16, 2013
Last update date May 19, 2014
Contact name WeiPing Chen
E-mail(s) weipingChen@niddk.nih.gov
Phone 301-496-0175
Organization name NIDDK/NIH
Department GCL
Lab Genomics Core Lab
Street address Bldg 8, Room 1A11, NIDDK/NIH
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL2112
Series (1)
GSE48916 Evidence that variation in adult body size among mammalian species is achieved by modulating the pace of a growth-regulating genetic program

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
AFFX-BioB-3_at 11.0376
AFFX-BioB-5_at 10.3981
AFFX-BioB-M_at 10.8944
AFFX-BioC-3_at 10.677
AFFX-BioC-5_at 11.6211
AFFX-BioDn-3_at 13.735
AFFX-BioDn-5_at 11.8618
AFFX-Bt-A00196-1_s_at 4.63113
AFFX-Bt-AB076373-1_at 5.34711
AFFX-Bt-AF292559-1_at 3.55218
AFFX-Bt-AF292559-2_s_at 3.19004
AFFX-Bt-AF292559-3_s_at 3.59235
AFFX-Bt-AF292559-4_s_at 4.8064
AFFX-Bt-AF292560-1_s_at 3.8955
AFFX-Bt-AF298789-1_at 4.2476
AFFX-Bt-AF323980-1_at 3.01907
AFFX-Bt-AJ002682-1_s_at 3.25994
AFFX-Bt-AJ002682-2_s_at 5.47612
AFFX-Bt-AJ132968-1_at 4.46594
AFFX-Bt-AY056050-1_at 4.72186

Total number of rows: 24128

Table truncated, full table size 582 Kbytes.




Supplementary file Size Download File type/resource
GSM1186768_09-24-10_J.Baron17_AD_Bovine_Kidney_FD90_14A.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM1186768_09-24-10_J.Baron17_AD_Bovine_Kidney_FD90_14A.CHP.gz 6.1 Mb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap