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Sample GSM1218171 Query DataSets for GSM1218171
Status Public on Jan 21, 2014
Title Sample 17
Sample type RNA
 
Source name skin from normal mouse
Organism Mus musculus
Characteristics strain: C57BL/6
treatment: naïve
condition: Normal
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using RNeasy Micro Kit (Qiagen, Valencia, CA) according to the manufacturer’s protocol with on-column DNase digestion
Label biotin
Label protocol GeneChip Affymetrix protocol
 
Hybridization protocol RNA was hybridized mouse4302 chips to measure relative gene expression.
Scan protocol Hewlett-Packard GeneArray Scanner
Description skin from normal mouse
Data processing GCRMA (using gcrma package from R/Bioconductor)
 
Submission date Aug 28, 2013
Last update date May 10, 2016
Contact name Mayte Suarez-Farinas
E-mail(s) mayte.suarezfarinas@mssm.edu
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
 
Platform ID GPL1261
Series (1)
GSE50400 Suppression of molecular inflammatory pathways by Toll-like Receptor 7, 8, and 9 antagonists in a model of IL-23-induced skin inflammation
Relations
Reanalyzed by GSE81119

Data table header descriptions
ID_REF
VALUE Normalized Expression values in log-2 scale

Data table
ID_REF VALUE
1415670_at 10.90117502
1415671_at 12.42110764
1415672_at 12.06874543
1415673_at 11.70384007
1415674_a_at 10.97484302
1415675_at 11.51410098
1415676_a_at 13.11935901
1415677_at 11.9048764
1415678_at 13.64811553
1415679_at 12.74141753
1415680_at 10.64868103
1415681_at 11.34272554
1415682_at 9.889153148
1415683_at 11.55092335
1415684_at 10.205472
1415685_at 10.15734825
1415686_at 12.70294343
1415687_a_at 13.89761885
1415688_at 12.106031
1415689_s_at 9.248777799

Total number of rows: 45101

Table truncated, full table size 1027 Kbytes.




Supplementary file Size Download File type/resource
GSM1218171_Idera_17_MG430_2.0_Xuan_11152012.CEL.gz 4.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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