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Sample GSM126535 Query DataSets for GSM126535
Status Public on Oct 01, 2006
Title 3hvsRef
Sample type RNA
 
Channel 1
Source name 3 hour
Organism Burkholderia pseudomallei K96243
Characteristics Strain: K96243
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction, Megaclear Ambion purification of total RNA, MICROBexpress Ambion Bacterial Messenger RNA extraction Kit"
Label Cy3
Label protocol Approximately 1.5ug of mRNA was processed to produce amino-allyl labelled cDNA
 
Channel 2
Source name Reference
Organism Burkholderia pseudomallei K96243
Characteristics Strain: K96243
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction, Megaclear Ambion purification of total RNA, MICROBexpress Ambion Bacterial Messenger RNA extraction Kit"
Label Cy5
Label protocol Approximately 1.5ug of mRNA was processed to produce amino-allyl labelled cDNA
 
 
Hybridization protocol J. David Gladstone Institutes Genomic Core Laboratory SOP
Scan protocol J. David Gladstone Institutes Genomic Core Laboratory SOP
Description Series of 47 timed samples
Data processing GeneData Expressionist
 
Submission date Aug 10, 2006
Last update date Aug 14, 2006
Contact name Fiona Rodrigues
Organization name Genome Institute of Singapore
Department Cell and Medical Biology
Lab 4
Street address 60 Biopolis Street, #02-01 Genome
City Singapore
ZIP/Postal code 138672
Country Singapore
 
Platform ID GPL4078
Series (1)
GSE5495 Genome-Wide Mapping of Growth Regulated Genes in Burkholderia pseudomallei

Data table header descriptions
ID_REF
VALUE Normalised log ratios; data normalised using a LOWESS protocol; missing profiles are estimted using SVDImpute

Data table
ID_REF VALUE
159903 -0.296407
160003 0.092694
160103 -0.581314
160203 0.027606
160803 0.069183
161403 -0.03847
162103 0.089727
162203 0.107333
162403 0.484076
162503 0.025956
162603 -0.107696
163703 -0.026162
164103 -0.108441
164603 0.135615
165503 0.235027
165603 -0.128715
166103 -0.831375
166203 0.01589
166403 0.006419
166903 -0.031542

Total number of rows: 5289

Table truncated, full table size 88 Kbytes.




Supplementary file Size Download File type/resource
GSM126535.gpr.gz 1.2 Mb (ftp)(http) GPR

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